Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
H1fooQ8VIK3 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
H1fooQ8VIK3 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
H1fooQ8VIK3 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
H1fooQ8VIK3 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
H1fooQ8VIK3 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
H1fooQ8VIK3 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
H1fooQ8VIK3 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
H1fooQ8VIK3 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
H1fooQ8VIK3 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC9.62□□□□□ -0.87
H1fooQ8VIK3 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC9.62□□□□□ -0.87
H1fooQ8VIK3 Gm14071-201ENSMUST00000117817 509 ntBASIC9.62□□□□□ -0.87
H1fooQ8VIK3 Gm11783-201ENSMUST00000119549 885 ntBASIC9.62□□□□□ -0.87
H1fooQ8VIK3 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
H1fooQ8VIK3 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC9.62□□□□□ -0.87
H1fooQ8VIK3 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC9.62□□□□□ -0.87
H1fooQ8VIK3 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
H1fooQ8VIK3 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC9.62□□□□□ -0.87
H1fooQ8VIK3 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC9.62□□□□□ -0.87
H1fooQ8VIK3 Gm8815-201ENSMUST00000173809 620 ntBASIC9.62□□□□□ -0.87
H1fooQ8VIK3 Gm43438-201ENSMUST00000198133 379 ntBASIC9.62□□□□□ -0.87
H1fooQ8VIK3 Gm43966-201ENSMUST00000203301 612 ntBASIC9.62□□□□□ -0.87
H1fooQ8VIK3 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
H1fooQ8VIK3 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC9.62□□□□□ -0.87
H1fooQ8VIK3 AC133602.1-201ENSMUST00000227510 509 ntBASIC9.62□□□□□ -0.87
H1fooQ8VIK3 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
H1fooQ8VIK3 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC9.62□□□□□ -0.87
H1fooQ8VIK3 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
H1fooQ8VIK3 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
H1fooQ8VIK3 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
H1fooQ8VIK3 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
H1fooQ8VIK3 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
H1fooQ8VIK3 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
H1fooQ8VIK3 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
H1fooQ8VIK3 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
H1fooQ8VIK3 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
H1fooQ8VIK3 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
H1fooQ8VIK3 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
H1fooQ8VIK3 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC9.62□□□□□ -0.87
H1fooQ8VIK3 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
H1fooQ8VIK3 Gm14150-201ENSMUST00000122404 1354 ntBASIC9.62□□□□□ -0.87
H1fooQ8VIK3 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
H1fooQ8VIK3 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
H1fooQ8VIK3 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC9.62□□□□□ -0.87
H1fooQ8VIK3 Gm20052-201ENSMUST00000200831 1525 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
H1fooQ8VIK3 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC9.61□□□□□ -0.87
H1fooQ8VIK3 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC9.61□□□□□ -0.87
H1fooQ8VIK3 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC9.61□□□□□ -0.87
H1fooQ8VIK3 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
H1fooQ8VIK3 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
H1fooQ8VIK3 Gm13812-201ENSMUST00000118061 1347 ntBASIC9.61□□□□□ -0.87
H1fooQ8VIK3 Gm13810-201ENSMUST00000118584 1347 ntBASIC9.61□□□□□ -0.87
H1fooQ8VIK3 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
H1fooQ8VIK3 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
H1fooQ8VIK3 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
H1fooQ8VIK3 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC9.61□□□□□ -0.87
H1fooQ8VIK3 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
H1fooQ8VIK3 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC9.61□□□□□ -0.87
H1fooQ8VIK3 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
H1fooQ8VIK3 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
H1fooQ8VIK3 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
H1fooQ8VIK3 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
H1fooQ8VIK3 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
H1fooQ8VIK3 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
H1fooQ8VIK3 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
H1fooQ8VIK3 Mir877-201ENSMUST00000104738 85 ntBASIC9.61□□□□□ -0.87
H1fooQ8VIK3 Gm12196-201ENSMUST00000120954 262 ntBASIC9.61□□□□□ -0.87
H1fooQ8VIK3 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC9.61□□□□□ -0.87
H1fooQ8VIK3 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
H1fooQ8VIK3 Gm25881-201ENSMUST00000157783 103 ntBASIC9.61□□□□□ -0.87
H1fooQ8VIK3 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC9.61□□□□□ -0.87
H1fooQ8VIK3 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC9.61□□□□□ -0.87
H1fooQ8VIK3 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
H1fooQ8VIK3 Gm45113-201ENSMUST00000207518 165 ntBASIC9.61□□□□□ -0.87
H1fooQ8VIK3 Gm45575-201ENSMUST00000210283 548 ntBASIC9.61□□□□□ -0.87
H1fooQ8VIK3 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC9.61□□□□□ -0.87
H1fooQ8VIK3 AC107638.1-201ENSMUST00000213690 1061 ntBASIC9.61□□□□□ -0.87
H1fooQ8VIK3 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC9.61□□□□□ -0.87
H1fooQ8VIK3 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC9.61□□□□□ -0.87
H1fooQ8VIK3 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
H1fooQ8VIK3 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
H1fooQ8VIK3 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
H1fooQ8VIK3 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
H1fooQ8VIK3 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
H1fooQ8VIK3 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
H1fooQ8VIK3 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
H1fooQ8VIK3 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
H1fooQ8VIK3 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC9.61□□□□□ -0.87
H1fooQ8VIK3 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
H1fooQ8VIK3 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
H1fooQ8VIK3 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
H1fooQ8VIK3 Gm5859-201ENSMUST00000165401 2324 ntBASIC9.61□□□□□ -0.87
H1fooQ8VIK3 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
H1fooQ8VIK3 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
H1fooQ8VIK3 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
H1fooQ8VIK3 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
H1fooQ8VIK3 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
H1fooQ8VIK3 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
H1fooQ8VIK3 Gm21136-201ENSMUST00000186812 2575 ntBASIC9.61□□□□□ -0.87
H1fooQ8VIK3 Gm6605-201ENSMUST00000031488 2574 ntBASIC9.61□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms