Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Gm44158-201ENSMUST00000203881 505 ntBASIC13.35□□□□□ -0.27
Alx1Q8C8B0 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Alx1Q8C8B0 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC13.35□□□□□ -0.27
Alx1Q8C8B0 AC159103.1-201ENSMUST00000228325 429 ntBASIC13.35□□□□□ -0.27
Alx1Q8C8B0 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Alx1Q8C8B0 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
Alx1Q8C8B0 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Alx1Q8C8B0 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Alx1Q8C8B0 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Alx1Q8C8B0 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Alx1Q8C8B0 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Alx1Q8C8B0 Gm8899-201ENSMUST00000214635 1332 ntBASIC13.35□□□□□ -0.27
Alx1Q8C8B0 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Alx1Q8C8B0 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Alx1Q8C8B0 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.34□□□□□ -0.27
Alx1Q8C8B0 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Alx1Q8C8B0 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Alx1Q8C8B0 Gm35850-202ENSMUST00000211705 2120 ntBASIC13.34□□□□□ -0.27
Alx1Q8C8B0 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Alx1Q8C8B0 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Alx1Q8C8B0 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC13.34□□□□□ -0.27
Alx1Q8C8B0 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Alx1Q8C8B0 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Alx1Q8C8B0 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Alx1Q8C8B0 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Alx1Q8C8B0 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Alx1Q8C8B0 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Alx1Q8C8B0 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Alx1Q8C8B0 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Alx1Q8C8B0 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Alx1Q8C8B0 Gm6560-201ENSMUST00000198588 1591 ntBASIC13.34□□□□□ -0.27
Alx1Q8C8B0 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Alx1Q8C8B0 Gm25766-201ENSMUST00000104101 131 ntBASIC13.34□□□□□ -0.27
Alx1Q8C8B0 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Alx1Q8C8B0 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Alx1Q8C8B0 Gm11892-201ENSMUST00000117711 1202 ntBASIC13.34□□□□□ -0.27
Alx1Q8C8B0 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC13.34□□□□□ -0.27
Alx1Q8C8B0 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Alx1Q8C8B0 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Alx1Q8C8B0 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Alx1Q8C8B0 Gm25554-201ENSMUST00000158075 113 ntBASIC13.34□□□□□ -0.27
Alx1Q8C8B0 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC13.34□□□□□ -0.27
Alx1Q8C8B0 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Alx1Q8C8B0 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC13.34□□□□□ -0.27
Alx1Q8C8B0 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC13.34□□□□□ -0.27
Alx1Q8C8B0 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Alx1Q8C8B0 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Alx1Q8C8B0 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Alx1Q8C8B0 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC13.34□□□□□ -0.27
Alx1Q8C8B0 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Alx1Q8C8B0 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Alx1Q8C8B0 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Alx1Q8C8B0 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Alx1Q8C8B0 Gm43152-201ENSMUST00000202495 1638 ntBASIC13.34□□□□□ -0.27
Alx1Q8C8B0 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC13.34□□□□□ -0.27
Alx1Q8C8B0 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Alx1Q8C8B0 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Alx1Q8C8B0 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Alx1Q8C8B0 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Alx1Q8C8B0 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC13.34□□□□□ -0.27
Alx1Q8C8B0 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Alx1Q8C8B0 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Alx1Q8C8B0 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC13.33□□□□□ -0.27
Alx1Q8C8B0 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Alx1Q8C8B0 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Alx1Q8C8B0 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Alx1Q8C8B0 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Alx1Q8C8B0 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Alx1Q8C8B0 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Alx1Q8C8B0 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Alx1Q8C8B0 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Alx1Q8C8B0 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Alx1Q8C8B0 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Alx1Q8C8B0 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Alx1Q8C8B0 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Alx1Q8C8B0 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Alx1Q8C8B0 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Alx1Q8C8B0 Gm12899-201ENSMUST00000120565 551 ntBASIC13.33□□□□□ -0.28
Alx1Q8C8B0 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC13.33□□□□□ -0.28
Alx1Q8C8B0 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC13.33□□□□□ -0.28
Alx1Q8C8B0 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Alx1Q8C8B0 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Alx1Q8C8B0 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC13.33□□□□□ -0.28
Alx1Q8C8B0 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC13.33□□□□□ -0.28
Alx1Q8C8B0 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC13.33□□□□□ -0.28
Alx1Q8C8B0 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Alx1Q8C8B0 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC13.33□□□□□ -0.28
Alx1Q8C8B0 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Alx1Q8C8B0 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Alx1Q8C8B0 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Alx1Q8C8B0 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Alx1Q8C8B0 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Alx1Q8C8B0 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Alx1Q8C8B0 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Alx1Q8C8B0 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Alx1Q8C8B0 Gm17230-201ENSMUST00000171194 3942 ntBASIC13.33□□□□□ -0.28
Alx1Q8C8B0 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Alx1Q8C8B0 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Alx1Q8C8B0 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Alx1Q8C8B0 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms