Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col16a1Q8BLX7 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col16a1Q8BLX7 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.82□□□□□ -0.04
Col16a1Q8BLX7 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Col16a1Q8BLX7 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col16a1Q8BLX7 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col16a1Q8BLX7 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col16a1Q8BLX7 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col16a1Q8BLX7 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC14.82□□□□□ -0.04
Col16a1Q8BLX7 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col16a1Q8BLX7 Srp14-202ENSMUST00000110862 587 ntTSL 2 BASIC14.81□□□□□ -0.04
Col16a1Q8BLX7 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col16a1Q8BLX7 C030013C21Rik-201ENSMUST00000133400 795 ntTSL 3 BASIC14.81□□□□□ -0.04
Col16a1Q8BLX7 Gm33080-201ENSMUST00000205429 172 ntBASIC14.81□□□□□ -0.04
Col16a1Q8BLX7 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col16a1Q8BLX7 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Col16a1Q8BLX7 AC102569.1-201ENSMUST00000221563 685 ntBASIC14.81□□□□□ -0.04
Col16a1Q8BLX7 AC187103.3-201ENSMUST00000225725 646 ntBASIC14.81□□□□□ -0.04
Col16a1Q8BLX7 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col16a1Q8BLX7 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Col16a1Q8BLX7 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col16a1Q8BLX7 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col16a1Q8BLX7 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Col16a1Q8BLX7 Eif2c5-201ENSMUST00000125609 1416 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col16a1Q8BLX7 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Col16a1Q8BLX7 AC090962.2-201ENSMUST00000225064 1801 ntBASIC14.81□□□□□ -0.04
Col16a1Q8BLX7 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col16a1Q8BLX7 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC14.81□□□□□ -0.04
Col16a1Q8BLX7 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Col16a1Q8BLX7 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col16a1Q8BLX7 Ntrk2-204ENSMUST00000224259 3049 ntBASIC14.81□□□□□ -0.04
Col16a1Q8BLX7 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Col16a1Q8BLX7 Gm18806-201ENSMUST00000207607 1775 ntBASIC14.81□□□□□ -0.04
Col16a1Q8BLX7 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col16a1Q8BLX7 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col16a1Q8BLX7 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Col16a1Q8BLX7 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col16a1Q8BLX7 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col16a1Q8BLX7 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Col16a1Q8BLX7 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col16a1Q8BLX7 Gm43127-201ENSMUST00000195890 2789 ntBASIC14.81□□□□□ -0.04
Col16a1Q8BLX7 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col16a1Q8BLX7 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col16a1Q8BLX7 Gm6441-201ENSMUST00000120983 696 ntBASIC14.81□□□□□ -0.04
Col16a1Q8BLX7 Bola3-203ENSMUST00000122216 554 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col16a1Q8BLX7 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col16a1Q8BLX7 Tnni1-204ENSMUST00000139986 651 ntTSL 5 BASIC14.81□□□□□ -0.04
Col16a1Q8BLX7 Gm12676-201ENSMUST00000149078 808 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col16a1Q8BLX7 Gm36982-201ENSMUST00000193796 1128 ntBASIC14.81□□□□□ -0.04
Col16a1Q8BLX7 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC14.81□□□□□ -0.04
Col16a1Q8BLX7 Gm43460-201ENSMUST00000202491 1057 ntBASIC14.81□□□□□ -0.04
Col16a1Q8BLX7 Clec2h-202ENSMUST00000204416 386 ntTSL 3 BASIC14.81□□□□□ -0.04
Col16a1Q8BLX7 Ggta1-201ENSMUST00000044255 1221 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
Col16a1Q8BLX7 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col16a1Q8BLX7 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Col16a1Q8BLX7 AC166361.2-201ENSMUST00000219269 1415 ntBASIC14.8□□□□□ -0.04
Col16a1Q8BLX7 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC14.8□□□□□ -0.04
Col16a1Q8BLX7 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Col16a1Q8BLX7 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col16a1Q8BLX7 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col16a1Q8BLX7 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Col16a1Q8BLX7 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Col16a1Q8BLX7 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Col16a1Q8BLX7 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Col16a1Q8BLX7 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col16a1Q8BLX7 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Col16a1Q8BLX7 Cyp2a21-ps-201ENSMUST00000206638 1471 ntBASIC14.8□□□□□ -0.04
Col16a1Q8BLX7 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col16a1Q8BLX7 Hist1h4i-201ENSMUST00000102977 727 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Col16a1Q8BLX7 Mir1941-201ENSMUST00000157834 83 ntBASIC14.8□□□□□ -0.04
Col16a1Q8BLX7 Gm23582-201ENSMUST00000158530 139 ntBASIC14.8□□□□□ -0.04
Col16a1Q8BLX7 Gm7765-201ENSMUST00000182585 974 ntBASIC14.8□□□□□ -0.04
Col16a1Q8BLX7 Mrgprb7-ps-201ENSMUST00000190238 964 ntBASIC14.8□□□□□ -0.04
Col16a1Q8BLX7 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC14.8□□□□□ -0.04
Col16a1Q8BLX7 Gm44939-201ENSMUST00000206939 814 ntTSL 3 BASIC14.8□□□□□ -0.04
Col16a1Q8BLX7 AC107752.1-201ENSMUST00000219362 469 ntBASIC14.8□□□□□ -0.04
Col16a1Q8BLX7 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col16a1Q8BLX7 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col16a1Q8BLX7 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col16a1Q8BLX7 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col16a1Q8BLX7 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC14.8□□□□□ -0.04
Col16a1Q8BLX7 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Col16a1Q8BLX7 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Col16a1Q8BLX7 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col16a1Q8BLX7 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC14.79□□□□□ -0.04
Col16a1Q8BLX7 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Col16a1Q8BLX7 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col16a1Q8BLX7 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col16a1Q8BLX7 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Col16a1Q8BLX7 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC14.79□□□□□ -0.04
Col16a1Q8BLX7 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Col16a1Q8BLX7 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC14.79□□□□□ -0.04
Col16a1Q8BLX7 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col16a1Q8BLX7 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
Col16a1Q8BLX7 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col16a1Q8BLX7 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col16a1Q8BLX7 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col16a1Q8BLX7 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col16a1Q8BLX7 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col16a1Q8BLX7 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms