Protein–RNA interactions for Protein: Q811W0

Sox21, Transcription factor SOX-21, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox21Q811W0 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Sox21Q811W0 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC9.45□□□□□ -0.9
Sox21Q811W0 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Sox21Q811W0 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sox21Q811W0 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sox21Q811W0 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Sox21Q811W0 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sox21Q811W0 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sox21Q811W0 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Sox21Q811W0 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sox21Q811W0 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Sox21Q811W0 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sox21Q811W0 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC9.44□□□□□ -0.9
Sox21Q811W0 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sox21Q811W0 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sox21Q811W0 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sox21Q811W0 Exo1-201ENSMUST00000039725 7796 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sox21Q811W0 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Sox21Q811W0 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sox21Q811W0 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Sox21Q811W0 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Sox21Q811W0 Gm11246-201ENSMUST00000120880 345 ntBASIC9.44□□□□□ -0.9
Sox21Q811W0 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sox21Q811W0 Gm28388-201ENSMUST00000186262 437 ntBASIC9.44□□□□□ -0.9
Sox21Q811W0 Gm5852-201ENSMUST00000194119 1021 ntBASIC9.44□□□□□ -0.9
Sox21Q811W0 Gm5542-201ENSMUST00000195485 1089 ntBASIC9.44□□□□□ -0.9
Sox21Q811W0 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Sox21Q811W0 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC9.44□□□□□ -0.9
Sox21Q811W0 Gm45113-201ENSMUST00000207518 165 ntBASIC9.44□□□□□ -0.9
Sox21Q811W0 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC9.44□□□□□ -0.9
Sox21Q811W0 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC9.44□□□□□ -0.9
Sox21Q811W0 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC9.44□□□□□ -0.9
Sox21Q811W0 AC154290.1-201ENSMUST00000223786 1240 ntBASIC9.44□□□□□ -0.9
Sox21Q811W0 AC132901.1-201ENSMUST00000224345 508 ntBASIC9.44□□□□□ -0.9
Sox21Q811W0 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Sox21Q811W0 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Sox21Q811W0 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sox21Q811W0 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC9.44□□□□□ -0.9
Sox21Q811W0 Gm6157-201ENSMUST00000199935 1897 ntBASIC9.44□□□□□ -0.9
Sox21Q811W0 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Sox21Q811W0 AC154404.1-201ENSMUST00000223601 2077 ntBASIC9.44□□□□□ -0.9
Sox21Q811W0 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sox21Q811W0 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sox21Q811W0 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sox21Q811W0 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sox21Q811W0 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sox21Q811W0 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Sox21Q811W0 Gm43984-201ENSMUST00000204572 2864 ntBASIC9.44□□□□□ -0.9
Sox21Q811W0 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sox21Q811W0 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Sox21Q811W0 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sox21Q811W0 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sox21Q811W0 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Sox21Q811W0 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sox21Q811W0 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC9.43□□□□□ -0.9
Sox21Q811W0 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sox21Q811W0 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Sox21Q811W0 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sox21Q811W0 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sox21Q811W0 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sox21Q811W0 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sox21Q811W0 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sox21Q811W0 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Sox21Q811W0 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sox21Q811W0 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Sox21Q811W0 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Sox21Q811W0 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC9.43□□□□□ -0.9
Sox21Q811W0 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sox21Q811W0 CT009489.1-201ENSMUST00000227740 1893 ntBASIC9.43□□□□□ -0.9
Sox21Q811W0 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sox21Q811W0 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Sox21Q811W0 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Sox21Q811W0 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sox21Q811W0 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC9.43□□□□□ -0.9
Sox21Q811W0 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Sox21Q811W0 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sox21Q811W0 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC9.43□□□□□ -0.9
Sox21Q811W0 Gm25076-201ENSMUST00000104098 132 ntBASIC9.43□□□□□ -0.9
Sox21Q811W0 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sox21Q811W0 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Sox21Q811W0 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sox21Q811W0 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sox21Q811W0 Gm12899-201ENSMUST00000120565 551 ntBASIC9.43□□□□□ -0.9
Sox21Q811W0 Gm13937-201ENSMUST00000121000 988 ntBASIC9.43□□□□□ -0.9
Sox21Q811W0 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC9.43□□□□□ -0.9
Sox21Q811W0 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Sox21Q811W0 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Sox21Q811W0 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Sox21Q811W0 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
Sox21Q811W0 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sox21Q811W0 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC9.43□□□□□ -0.9
Sox21Q811W0 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sox21Q811W0 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC9.43□□□□□ -0.9
Sox21Q811W0 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sox21Q811W0 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sox21Q811W0 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sox21Q811W0 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
Sox21Q811W0 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Sox21Q811W0 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC9.43□□□□□ -0.9
Sox21Q811W0 Gm9645-201ENSMUST00000197131 792 ntBASIC9.43□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms