Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh19Q80TF3 Slc6a20b-201ENSMUST00000026273 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh19Q80TF3 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh19Q80TF3 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh19Q80TF3 Gm43242-201ENSMUST00000199507 1776 ntBASIC11.32□□□□□ -0.6
Pcdh19Q80TF3 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.32□□□□□ -0.6
Pcdh19Q80TF3 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh19Q80TF3 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh19Q80TF3 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh19Q80TF3 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh19Q80TF3 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC11.32□□□□□ -0.6
Pcdh19Q80TF3 Gm12419-201ENSMUST00000116649 636 ntBASIC11.32□□□□□ -0.6
Pcdh19Q80TF3 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC11.32□□□□□ -0.6
Pcdh19Q80TF3 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh19Q80TF3 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh19Q80TF3 Gm5778-201ENSMUST00000171003 1072 ntBASIC11.32□□□□□ -0.6
Pcdh19Q80TF3 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh19Q80TF3 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Pcdh19Q80TF3 Gm8502-201ENSMUST00000185708 901 ntBASIC11.32□□□□□ -0.6
Pcdh19Q80TF3 Gm21147-201ENSMUST00000186046 913 ntBASIC11.32□□□□□ -0.6
Pcdh19Q80TF3 Gm8510-201ENSMUST00000189202 895 ntBASIC11.32□□□□□ -0.6
Pcdh19Q80TF3 Gm2316-201ENSMUST00000190613 921 ntBASIC11.32□□□□□ -0.6
Pcdh19Q80TF3 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC11.32□□□□□ -0.6
Pcdh19Q80TF3 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC11.32□□□□□ -0.6
Pcdh19Q80TF3 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh19Q80TF3 CT010486.3-201ENSMUST00000224555 811 ntBASIC11.32□□□□□ -0.6
Pcdh19Q80TF3 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh19Q80TF3 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh19Q80TF3 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh19Q80TF3 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh19Q80TF3 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Pcdh19Q80TF3 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Pcdh19Q80TF3 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh19Q80TF3 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh19Q80TF3 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh19Q80TF3 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh19Q80TF3 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh19Q80TF3 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh19Q80TF3 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.32□□□□□ -0.6
Pcdh19Q80TF3 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh19Q80TF3 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh19Q80TF3 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh19Q80TF3 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh19Q80TF3 Gm5403-201ENSMUST00000117105 2795 ntBASIC11.32□□□□□ -0.6
Pcdh19Q80TF3 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Pcdh19Q80TF3 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Pcdh19Q80TF3 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh19Q80TF3 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh19Q80TF3 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh19Q80TF3 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh19Q80TF3 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Pcdh19Q80TF3 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Pcdh19Q80TF3 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh19Q80TF3 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Pcdh19Q80TF3 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Pcdh19Q80TF3 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh19Q80TF3 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh19Q80TF3 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh19Q80TF3 AC169511.2-201ENSMUST00000226674 2063 ntBASIC11.31□□□□□ -0.6
Pcdh19Q80TF3 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Pcdh19Q80TF3 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh19Q80TF3 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh19Q80TF3 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh19Q80TF3 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC11.31□□□□□ -0.6
Pcdh19Q80TF3 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Pcdh19Q80TF3 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh19Q80TF3 Gm22885-201ENSMUST00000157410 107 ntBASIC11.31□□□□□ -0.6
Pcdh19Q80TF3 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh19Q80TF3 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC11.31□□□□□ -0.6
Pcdh19Q80TF3 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC11.31□□□□□ -0.6
Pcdh19Q80TF3 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh19Q80TF3 Gm42518-201ENSMUST00000196277 938 ntBASIC11.31□□□□□ -0.6
Pcdh19Q80TF3 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC11.31□□□□□ -0.6
Pcdh19Q80TF3 Gm43520-201ENSMUST00000197996 164 ntBASIC11.31□□□□□ -0.6
Pcdh19Q80TF3 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh19Q80TF3 Gm43452-201ENSMUST00000201873 991 ntBASIC11.31□□□□□ -0.6
Pcdh19Q80TF3 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh19Q80TF3 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC11.31□□□□□ -0.6
Pcdh19Q80TF3 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh19Q80TF3 Gm7600-201ENSMUST00000209657 785 ntBASIC11.31□□□□□ -0.6
Pcdh19Q80TF3 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC11.31□□□□□ -0.6
Pcdh19Q80TF3 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC11.31□□□□□ -0.6
Pcdh19Q80TF3 CT030170.2-201ENSMUST00000223267 126 ntBASIC11.31□□□□□ -0.6
Pcdh19Q80TF3 Prrxl1-205ENSMUST00000228878 723 ntBASIC11.31□□□□□ -0.6
Pcdh19Q80TF3 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh19Q80TF3 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh19Q80TF3 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh19Q80TF3 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh19Q80TF3 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Pcdh19Q80TF3 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.31□□□□□ -0.6
Pcdh19Q80TF3 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh19Q80TF3 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh19Q80TF3 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh19Q80TF3 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.31□□□□□ -0.6
Pcdh19Q80TF3 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Pcdh19Q80TF3 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh19Q80TF3 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.31□□□□□ -0.6
Pcdh19Q80TF3 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh19Q80TF3 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh19Q80TF3 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms