Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Smchd1Q6P5D8 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smchd1Q6P5D8 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC12.52□□□□□ -0.4
Smchd1Q6P5D8 Gm43163-201ENSMUST00000196571 442 ntBASIC12.52□□□□□ -0.4
Smchd1Q6P5D8 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC12.52□□□□□ -0.4
Smchd1Q6P5D8 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC12.52□□□□□ -0.4
Smchd1Q6P5D8 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC12.52□□□□□ -0.4
Smchd1Q6P5D8 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC12.52□□□□□ -0.4
Smchd1Q6P5D8 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smchd1Q6P5D8 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smchd1Q6P5D8 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smchd1Q6P5D8 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smchd1Q6P5D8 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Smchd1Q6P5D8 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Smchd1Q6P5D8 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Smchd1Q6P5D8 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Smchd1Q6P5D8 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smchd1Q6P5D8 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smchd1Q6P5D8 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smchd1Q6P5D8 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smchd1Q6P5D8 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smchd1Q6P5D8 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Smchd1Q6P5D8 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Smchd1Q6P5D8 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smchd1Q6P5D8 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smchd1Q6P5D8 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smchd1Q6P5D8 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smchd1Q6P5D8 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smchd1Q6P5D8 Gm43931-201ENSMUST00000204817 2870 ntBASIC12.52□□□□□ -0.41
Smchd1Q6P5D8 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC12.52□□□□□ -0.41
Smchd1Q6P5D8 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC12.52□□□□□ -0.41
Smchd1Q6P5D8 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC12.52□□□□□ -0.41
Smchd1Q6P5D8 Gm42433-201ENSMUST00000196806 940 ntBASIC12.52□□□□□ -0.41
Smchd1Q6P5D8 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC12.52□□□□□ -0.41
Smchd1Q6P5D8 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC12.52□□□□□ -0.41
Smchd1Q6P5D8 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC12.52□□□□□ -0.41
Smchd1Q6P5D8 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smchd1Q6P5D8 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.52□□□□□ -0.41
Smchd1Q6P5D8 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smchd1Q6P5D8 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smchd1Q6P5D8 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC12.52□□□□□ -0.41
Smchd1Q6P5D8 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smchd1Q6P5D8 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smchd1Q6P5D8 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smchd1Q6P5D8 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smchd1Q6P5D8 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Smchd1Q6P5D8 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smchd1Q6P5D8 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smchd1Q6P5D8 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Smchd1Q6P5D8 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Smchd1Q6P5D8 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Smchd1Q6P5D8 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Smchd1Q6P5D8 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smchd1Q6P5D8 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Smchd1Q6P5D8 Gm6641-201ENSMUST00000196100 1315 ntBASIC12.51□□□□□ -0.41
Smchd1Q6P5D8 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Smchd1Q6P5D8 Gm24248-201ENSMUST00000157321 322 ntBASIC12.51□□□□□ -0.41
Smchd1Q6P5D8 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC12.51□□□□□ -0.41
Smchd1Q6P5D8 Gm19246-201ENSMUST00000173599 255 ntBASIC12.51□□□□□ -0.41
Smchd1Q6P5D8 Gm5700-201ENSMUST00000191483 989 ntBASIC12.51□□□□□ -0.41
Smchd1Q6P5D8 Gm9369-201ENSMUST00000196009 733 ntBASIC12.51□□□□□ -0.41
Smchd1Q6P5D8 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smchd1Q6P5D8 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smchd1Q6P5D8 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Smchd1Q6P5D8 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Smchd1Q6P5D8 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smchd1Q6P5D8 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smchd1Q6P5D8 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Smchd1Q6P5D8 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smchd1Q6P5D8 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smchd1Q6P5D8 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smchd1Q6P5D8 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smchd1Q6P5D8 Gm5308-201ENSMUST00000196752 1354 ntBASIC12.51□□□□□ -0.41
Smchd1Q6P5D8 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smchd1Q6P5D8 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smchd1Q6P5D8 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smchd1Q6P5D8 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smchd1Q6P5D8 Gm12816-201ENSMUST00000118069 1212 ntBASIC12.5□□□□□ -0.41
Smchd1Q6P5D8 Gm12663-201ENSMUST00000118481 958 ntBASIC12.5□□□□□ -0.41
Smchd1Q6P5D8 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC12.5□□□□□ -0.41
Smchd1Q6P5D8 Gm22379-201ENSMUST00000157480 131 ntBASIC12.5□□□□□ -0.41
Smchd1Q6P5D8 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC12.5□□□□□ -0.41
Smchd1Q6P5D8 AC158392.3-201ENSMUST00000224271 1284 ntBASIC12.5□□□□□ -0.41
Smchd1Q6P5D8 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smchd1Q6P5D8 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smchd1Q6P5D8 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smchd1Q6P5D8 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Smchd1Q6P5D8 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smchd1Q6P5D8 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.5□□□□□ -0.41
Smchd1Q6P5D8 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smchd1Q6P5D8 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC12.5□□□□□ -0.41
Smchd1Q6P5D8 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Smchd1Q6P5D8 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smchd1Q6P5D8 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smchd1Q6P5D8 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smchd1Q6P5D8 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Smchd1Q6P5D8 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Smchd1Q6P5D8 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Smchd1Q6P5D8 AC122811.1-201ENSMUST00000222257 2921 ntBASIC12.5□□□□□ -0.41
Smchd1Q6P5D8 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms