Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Fndc4Q3TR08 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Fndc4Q3TR08 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Fndc4Q3TR08 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Fndc4Q3TR08 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Fndc4Q3TR08 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Fndc4Q3TR08 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC9.8□□□□□ -0.84
Fndc4Q3TR08 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Fndc4Q3TR08 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Fndc4Q3TR08 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Fndc4Q3TR08 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Fndc4Q3TR08 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC9.8□□□□□ -0.84
Fndc4Q3TR08 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Fndc4Q3TR08 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC9.8□□□□□ -0.84
Fndc4Q3TR08 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Fndc4Q3TR08 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Fndc4Q3TR08 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Fndc4Q3TR08 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Fndc4Q3TR08 AC207128.2-201ENSMUST00000223708 1924 ntBASIC9.8□□□□□ -0.84
Fndc4Q3TR08 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC9.8□□□□□ -0.84
Fndc4Q3TR08 AC125409.1-201ENSMUST00000223213 3370 ntBASIC9.8□□□□□ -0.84
Fndc4Q3TR08 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Fndc4Q3TR08 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Fndc4Q3TR08 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Fndc4Q3TR08 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC9.79□□□□□ -0.84
Fndc4Q3TR08 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Fndc4Q3TR08 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Fndc4Q3TR08 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC9.79□□□□□ -0.84
Fndc4Q3TR08 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Fndc4Q3TR08 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Fndc4Q3TR08 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Fndc4Q3TR08 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Fndc4Q3TR08 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Fndc4Q3TR08 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Fndc4Q3TR08 Gm38089-201ENSMUST00000193585 1514 ntBASIC9.79□□□□□ -0.84
Fndc4Q3TR08 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Fndc4Q3TR08 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Fndc4Q3TR08 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Fndc4Q3TR08 Gm11989-201ENSMUST00000117240 672 ntBASIC9.79□□□□□ -0.84
Fndc4Q3TR08 Gm11362-201ENSMUST00000118838 850 ntBASIC9.79□□□□□ -0.84
Fndc4Q3TR08 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC9.79□□□□□ -0.84
Fndc4Q3TR08 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC9.79□□□□□ -0.84
Fndc4Q3TR08 Gm5070-201ENSMUST00000177599 862 ntBASIC9.79□□□□□ -0.84
Fndc4Q3TR08 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC9.79□□□□□ -0.84
Fndc4Q3TR08 Gm38317-201ENSMUST00000195564 343 ntBASIC9.79□□□□□ -0.84
Fndc4Q3TR08 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC9.79□□□□□ -0.84
Fndc4Q3TR08 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC9.79□□□□□ -0.84
Fndc4Q3TR08 Rprl1-202ENSMUST00000198476 238 ntBASIC9.79□□□□□ -0.84
Fndc4Q3TR08 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Fndc4Q3TR08 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC9.79□□□□□ -0.84
Fndc4Q3TR08 Gm44651-201ENSMUST00000207343 372 ntBASIC9.79□□□□□ -0.84
Fndc4Q3TR08 Gm45598-202ENSMUST00000210719 986 ntBASIC9.79□□□□□ -0.84
Fndc4Q3TR08 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Fndc4Q3TR08 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC9.79□□□□□ -0.84
Fndc4Q3TR08 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC9.79□□□□□ -0.84
Fndc4Q3TR08 AC154171.1-201ENSMUST00000224610 643 ntBASIC9.79□□□□□ -0.84
Fndc4Q3TR08 Gzmn-202ENSMUST00000225535 989 ntBASIC9.79□□□□□ -0.84
Fndc4Q3TR08 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Fndc4Q3TR08 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC9.79□□□□□ -0.84
Fndc4Q3TR08 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC9.79□□□□□ -0.84
Fndc4Q3TR08 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Fndc4Q3TR08 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Fndc4Q3TR08 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Fndc4Q3TR08 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC9.79□□□□□ -0.84
Fndc4Q3TR08 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Fndc4Q3TR08 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC9.79□□□□□ -0.84
Fndc4Q3TR08 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Fndc4Q3TR08 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC9.79□□□□□ -0.84
Fndc4Q3TR08 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Fndc4Q3TR08 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC9.79□□□□□ -0.84
Fndc4Q3TR08 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Fndc4Q3TR08 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Fndc4Q3TR08 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Fndc4Q3TR08 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Fndc4Q3TR08 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Fndc4Q3TR08 Gm10782-202ENSMUST00000223775 1480 ntBASIC9.79□□□□□ -0.84
Fndc4Q3TR08 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Fndc4Q3TR08 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Fndc4Q3TR08 Gm3836-201ENSMUST00000211377 1613 ntBASIC9.78□□□□□ -0.84
Fndc4Q3TR08 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Fndc4Q3TR08 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Fndc4Q3TR08 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Fndc4Q3TR08 Gm37348-201ENSMUST00000193104 1789 ntBASIC9.78□□□□□ -0.84
Fndc4Q3TR08 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Fndc4Q3TR08 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Fndc4Q3TR08 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC9.78□□□□□ -0.84
Fndc4Q3TR08 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Fndc4Q3TR08 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Fndc4Q3TR08 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Fndc4Q3TR08 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Fndc4Q3TR08 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC9.78□□□□□ -0.84
Fndc4Q3TR08 AC129336.2-201ENSMUST00000218053 3086 ntBASIC9.78□□□□□ -0.84
Fndc4Q3TR08 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Fndc4Q3TR08 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Fndc4Q3TR08 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Fndc4Q3TR08 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Fndc4Q3TR08 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Fndc4Q3TR08 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Fndc4Q3TR08 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Fndc4Q3TR08 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC9.78□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms