Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Ush2AQ2QI47 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ush2AQ2QI47 Diablo-207ENSMUST00000145152 2588 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Ush2AQ2QI47 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ush2AQ2QI47 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Ush2AQ2QI47 Gm42833-201ENSMUST00000196019 2124 ntBASIC5.84□□□□□ -1.47
Ush2AQ2QI47 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC5.84□□□□□ -1.47
Ush2AQ2QI47 Zcchc9-201ENSMUST00000022121 1541 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ush2AQ2QI47 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ush2AQ2QI47 4930447F24Rik-201ENSMUST00000194140 1341 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Ush2AQ2QI47 Tmsb4x-203ENSMUST00000112176 698 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Ush2AQ2QI47 Zfx-202ENSMUST00000113925 879 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Ush2AQ2QI47 5031425E22Rik-203ENSMUST00000188328 828 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Ush2AQ2QI47 Gm43013-201ENSMUST00000198216 247 ntBASIC5.84□□□□□ -1.47
Ush2AQ2QI47 Flt3l-210ENSMUST00000211246 852 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ush2AQ2QI47 AC124173.1-201ENSMUST00000223701 189 ntBASIC5.84□□□□□ -1.47
Ush2AQ2QI47 AC123692.1-201ENSMUST00000227514 730 ntBASIC5.84□□□□□ -1.47
Ush2AQ2QI47 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ush2AQ2QI47 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Ush2AQ2QI47 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Ush2AQ2QI47 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ush2AQ2QI47 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ush2AQ2QI47 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ush2AQ2QI47 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ush2AQ2QI47 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC5.84□□□□□ -1.47
Ush2AQ2QI47 Gm7190-201ENSMUST00000118669 1452 ntBASIC5.84□□□□□ -1.47
Ush2AQ2QI47 Fkbp6-201ENSMUST00000044972 1447 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ush2AQ2QI47 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Ush2AQ2QI47 Gm23822-201ENSMUST00000158739 128 ntBASIC5.84□□□□□ -1.47
Ush2AQ2QI47 Gm5037-201ENSMUST00000205327 618 ntBASIC5.84□□□□□ -1.47
Ush2AQ2QI47 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Ush2AQ2QI47 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Ush2AQ2QI47 Olfr450-202ENSMUST00000218832 1899 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Ush2AQ2QI47 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ush2AQ2QI47 AC131081.1-201ENSMUST00000219535 1736 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Ush2AQ2QI47 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ush2AQ2QI47 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC5.84□□□□□ -1.47
Ush2AQ2QI47 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ush2AQ2QI47 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ush2AQ2QI47 Mfap5-207ENSMUST00000148517 1506 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ush2AQ2QI47 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Ush2AQ2QI47 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ush2AQ2QI47 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC5.84□□□□□ -1.47
Ush2AQ2QI47 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.48
Ush2AQ2QI47 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
Ush2AQ2QI47 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Ush2AQ2QI47 Babam2-203ENSMUST00000114507 1143 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
Ush2AQ2QI47 Gm12075-201ENSMUST00000117426 397 ntBASIC5.84□□□□□ -1.48
Ush2AQ2QI47 Gm11962-201ENSMUST00000145746 255 ntBASIC5.84□□□□□ -1.48
Ush2AQ2QI47 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.48
Ush2AQ2QI47 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
Ush2AQ2QI47 Rps28-205ENSMUST00000173844 382 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Ush2AQ2QI47 Magea2-203ENSMUST00000178950 1299 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
Ush2AQ2QI47 Gm27617-201ENSMUST00000184321 168 ntBASIC5.84□□□□□ -1.48
Ush2AQ2QI47 Gm21013-201ENSMUST00000184952 1201 ntBASIC5.84□□□□□ -1.48
Ush2AQ2QI47 Gm38153-201ENSMUST00000195484 472 ntBASIC5.84□□□□□ -1.48
Ush2AQ2QI47 Trav4-1-201ENSMUST00000199078 330 ntBASIC5.84□□□□□ -1.48
Ush2AQ2QI47 Gm11149-202ENSMUST00000215070 1169 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
Ush2AQ2QI47 2900045O20Rik-201ENSMUST00000218374 1292 ntTSL 2 BASIC5.84□□□□□ -1.48
Ush2AQ2QI47 CT025642.1-201ENSMUST00000224734 1219 ntBASIC5.84□□□□□ -1.48
Ush2AQ2QI47 Myl10-201ENSMUST00000005611 688 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Ush2AQ2QI47 Mgst2-201ENSMUST00000099106 603 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Ush2AQ2QI47 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Ush2AQ2QI47 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
Ush2AQ2QI47 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
Ush2AQ2QI47 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.48
Ush2AQ2QI47 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC5.84□□□□□ -1.48
Ush2AQ2QI47 Bgn-207ENSMUST00000169489 1574 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.48
Ush2AQ2QI47 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC5.84□□□□□ -1.48
Ush2AQ2QI47 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
Ush2AQ2QI47 Gm44573-201ENSMUST00000191753 2370 ntBASIC5.84□□□□□ -1.48
Ush2AQ2QI47 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.48
Ush2AQ2QI47 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ush2AQ2QI47 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ush2AQ2QI47 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ush2AQ2QI47 Ighv1-72-201ENSMUST00000103541 396 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Ush2AQ2QI47 n-R5s51-201ENSMUST00000104473 123 ntBASIC5.83□□□□□ -1.48
Ush2AQ2QI47 S100a16-205ENSMUST00000107334 879 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
Ush2AQ2QI47 Gm12220-201ENSMUST00000118476 172 ntBASIC5.83□□□□□ -1.48
Ush2AQ2QI47 Gm14686-201ENSMUST00000119926 343 ntBASIC5.83□□□□□ -1.48
Ush2AQ2QI47 Chn1os1-201ENSMUST00000123613 636 ntTSL 3 BASIC5.83□□□□□ -1.48
Ush2AQ2QI47 Gm21454-201ENSMUST00000178599 1285 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Ush2AQ2QI47 Gm6463-201ENSMUST00000182090 966 ntBASIC5.83□□□□□ -1.48
Ush2AQ2QI47 Tac1-203ENSMUST00000184986 691 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Ush2AQ2QI47 Igkv12-42-201ENSMUST00000198769 327 ntBASIC5.83□□□□□ -1.48
Ush2AQ2QI47 AC154528.3-201ENSMUST00000228011 679 ntBASIC5.83□□□□□ -1.48
Ush2AQ2QI47 Llcfc1-201ENSMUST00000031900 741 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ush2AQ2QI47 Hsd17b6-202ENSMUST00000219183 1522 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ush2AQ2QI47 Rnf216-209ENSMUST00000200607 3704 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ush2AQ2QI47 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ush2AQ2QI47 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ush2AQ2QI47 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ush2AQ2QI47 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ush2AQ2QI47 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ush2AQ2QI47 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ush2AQ2QI47 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ush2AQ2QI47 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC5.83□□□□□ -1.48
Ush2AQ2QI47 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ush2AQ2QI47 Vegfa-204ENSMUST00000113520 654 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Ush2AQ2QI47 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC5.83□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms