Protein–RNA interactions for Protein: Q07409

Cntn3, Contactin-3, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn3Q07409 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cntn3Q07409 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cntn3Q07409 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cntn3Q07409 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Cntn3Q07409 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.07□□□□□ -0.48
Cntn3Q07409 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cntn3Q07409 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cntn3Q07409 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cntn3Q07409 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC12.07□□□□□ -0.48
Cntn3Q07409 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cntn3Q07409 AC124397.2-201ENSMUST00000225575 2215 ntBASIC12.07□□□□□ -0.48
Cntn3Q07409 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cntn3Q07409 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cntn3Q07409 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC12.07□□□□□ -0.48
Cntn3Q07409 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cntn3Q07409 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cntn3Q07409 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cntn3Q07409 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cntn3Q07409 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cntn3Q07409 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cntn3Q07409 Gm16166-201ENSMUST00000118291 787 ntBASIC12.07□□□□□ -0.48
Cntn3Q07409 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC12.07□□□□□ -0.48
Cntn3Q07409 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC12.07□□□□□ -0.48
Cntn3Q07409 Gm22138-201ENSMUST00000158748 128 ntBASIC12.07□□□□□ -0.48
Cntn3Q07409 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cntn3Q07409 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC12.07□□□□□ -0.48
Cntn3Q07409 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cntn3Q07409 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Cntn3Q07409 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cntn3Q07409 Gm4978-201ENSMUST00000071565 801 ntBASIC12.07□□□□□ -0.48
Cntn3Q07409 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Cntn3Q07409 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cntn3Q07409 Olfr584-201ENSMUST00000098210 964 ntBASIC12.07□□□□□ -0.48
Cntn3Q07409 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cntn3Q07409 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Cntn3Q07409 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cntn3Q07409 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cntn3Q07409 AC166836.1-201ENSMUST00000219933 1795 ntBASIC12.07□□□□□ -0.48
Cntn3Q07409 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cntn3Q07409 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cntn3Q07409 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cntn3Q07409 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Cntn3Q07409 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Cntn3Q07409 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Cntn3Q07409 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cntn3Q07409 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Cntn3Q07409 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cntn3Q07409 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cntn3Q07409 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cntn3Q07409 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC12.07□□□□□ -0.48
Cntn3Q07409 AC154849.3-201ENSMUST00000223733 1660 ntBASIC12.06□□□□□ -0.48
Cntn3Q07409 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cntn3Q07409 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Cntn3Q07409 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cntn3Q07409 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cntn3Q07409 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.06□□□□□ -0.48
Cntn3Q07409 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cntn3Q07409 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cntn3Q07409 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Cntn3Q07409 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC12.06□□□□□ -0.48
Cntn3Q07409 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cntn3Q07409 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cntn3Q07409 Gm25076-201ENSMUST00000104098 132 ntBASIC12.06□□□□□ -0.48
Cntn3Q07409 Gm12419-201ENSMUST00000116649 636 ntBASIC12.06□□□□□ -0.48
Cntn3Q07409 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC12.06□□□□□ -0.48
Cntn3Q07409 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Cntn3Q07409 Gm27438-201ENSMUST00000183480 110 ntBASIC12.06□□□□□ -0.48
Cntn3Q07409 Gm37981-201ENSMUST00000194280 535 ntBASIC12.06□□□□□ -0.48
Cntn3Q07409 Gm43520-201ENSMUST00000197996 164 ntBASIC12.06□□□□□ -0.48
Cntn3Q07409 Gm8574-201ENSMUST00000203207 924 ntBASIC12.06□□□□□ -0.48
Cntn3Q07409 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cntn3Q07409 AC154257.1-202ENSMUST00000224729 843 ntBASIC12.06□□□□□ -0.48
Cntn3Q07409 AC118639.2-201ENSMUST00000226289 223 ntBASIC12.06□□□□□ -0.48
Cntn3Q07409 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC12.06□□□□□ -0.48
Cntn3Q07409 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cntn3Q07409 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cntn3Q07409 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cntn3Q07409 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cntn3Q07409 Gm36957-201ENSMUST00000192982 2824 ntBASIC12.06□□□□□ -0.48
Cntn3Q07409 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cntn3Q07409 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cntn3Q07409 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cntn3Q07409 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Cntn3Q07409 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cntn3Q07409 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Cntn3Q07409 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Cntn3Q07409 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cntn3Q07409 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cntn3Q07409 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC12.06□□□□□ -0.48
Cntn3Q07409 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cntn3Q07409 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.06□□□□□ -0.48
Cntn3Q07409 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Cntn3Q07409 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
Cntn3Q07409 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cntn3Q07409 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cntn3Q07409 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cntn3Q07409 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cntn3Q07409 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC12.05□□□□□ -0.48
Cntn3Q07409 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.05□□□□□ -0.48
Cntn3Q07409 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms