Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Astn1-205ENSMUST00000193042 7248 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tpm1P58771 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.78□□□□□ -0.36
Tpm1P58771 Gm43133-201ENSMUST00000197472 463 ntBASIC12.78□□□□□ -0.36
Tpm1P58771 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC12.78□□□□□ -0.36
Tpm1P58771 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tpm1P58771 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tpm1P58771 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tpm1P58771 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Tpm1P58771 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Tpm1P58771 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC12.78□□□□□ -0.36
Tpm1P58771 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Tpm1P58771 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tpm1P58771 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tpm1P58771 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tpm1P58771 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tpm1P58771 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Tpm1P58771 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tpm1P58771 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.78□□□□□ -0.36
Tpm1P58771 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tpm1P58771 Gm5703-201ENSMUST00000186658 3973 ntBASIC12.78□□□□□ -0.36
Tpm1P58771 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tpm1P58771 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Tpm1P58771 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Tpm1P58771 Adgrl3-217ENSMUST00000121707 6690 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Tpm1P58771 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tpm1P58771 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Tpm1P58771 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Tpm1P58771 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tpm1P58771 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tpm1P58771 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC12.77□□□□□ -0.36
Tpm1P58771 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tpm1P58771 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tpm1P58771 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Tpm1P58771 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tpm1P58771 Hivep1-201ENSMUST00000060148 8753 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Tpm1P58771 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tpm1P58771 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tpm1P58771 Gm18806-201ENSMUST00000207607 1775 ntBASIC12.77□□□□□ -0.36
Tpm1P58771 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.36
Tpm1P58771 Trp73-205ENSMUST00000133533 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tpm1P58771 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tpm1P58771 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tpm1P58771 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tpm1P58771 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tpm1P58771 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.77□□□□□ -0.37
Tpm1P58771 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.77□□□□□ -0.37
Tpm1P58771 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tpm1P58771 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Tpm1P58771 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Tpm1P58771 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.77□□□□□ -0.37
Tpm1P58771 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.77□□□□□ -0.37
Tpm1P58771 Gm6013-201ENSMUST00000212264 699 ntBASIC12.77□□□□□ -0.37
Tpm1P58771 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.77□□□□□ -0.37
Tpm1P58771 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.77□□□□□ -0.37
Tpm1P58771 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.77□□□□□ -0.37
Tpm1P58771 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tpm1P58771 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tpm1P58771 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Tpm1P58771 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Tpm1P58771 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
Tpm1P58771 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tpm1P58771 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Tpm1P58771 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tpm1P58771 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tpm1P58771 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tpm1P58771 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC12.77□□□□□ -0.37
Tpm1P58771 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.77□□□□□ -0.37
Tpm1P58771 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tpm1P58771 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tpm1P58771 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tpm1P58771 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Tpm1P58771 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tpm1P58771 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tpm1P58771 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Tpm1P58771 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC12.77□□□□□ -0.37
Tpm1P58771 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Tpm1P58771 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tpm1P58771 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tpm1P58771 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tpm1P58771 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tpm1P58771 Flna-201ENSMUST00000033699 8312 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Tpm1P58771 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tpm1P58771 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tpm1P58771 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tpm1P58771 Fam198b-202ENSMUST00000118853 6729 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Tpm1P58771 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Tpm1P58771 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tpm1P58771 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tpm1P58771 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.76□□□□□ -0.37
Tpm1P58771 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tpm1P58771 Gm14644-201ENSMUST00000116671 647 ntBASIC12.76□□□□□ -0.37
Tpm1P58771 Gm11511-201ENSMUST00000118146 540 ntBASIC12.76□□□□□ -0.37
Tpm1P58771 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tpm1P58771 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.76□□□□□ -0.37
Tpm1P58771 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Tpm1P58771 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.76□□□□□ -0.37
Tpm1P58771 Gm27514-201ENSMUST00000183692 110 ntBASIC12.76□□□□□ -0.37
Tpm1P58771 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tpm1P58771 Gm2553-201ENSMUST00000215986 605 ntBASIC12.76□□□□□ -0.37
Tpm1P58771 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms