Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 AY761184-201ENSMUST00000071886 503 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NcanP55066 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
NcanP55066 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
NcanP55066 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NcanP55066 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
NcanP55066 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC12.09□□□□□ -0.47
NcanP55066 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
NcanP55066 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NcanP55066 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NcanP55066 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
NcanP55066 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
NcanP55066 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NcanP55066 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
NcanP55066 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NcanP55066 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NcanP55066 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
NcanP55066 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
NcanP55066 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NcanP55066 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
NcanP55066 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
NcanP55066 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
NcanP55066 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
NcanP55066 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
NcanP55066 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
NcanP55066 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
NcanP55066 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
NcanP55066 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
NcanP55066 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
NcanP55066 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
NcanP55066 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
NcanP55066 Gm46339-201ENSMUST00000222720 3539 ntBASIC12.08□□□□□ -0.48
NcanP55066 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
NcanP55066 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
NcanP55066 Gm17514-201ENSMUST00000181863 1102 ntTSL 5 BASIC12.08□□□□□ -0.48
NcanP55066 3930402G23Rik-202ENSMUST00000208615 581 ntTSL 3 BASIC12.08□□□□□ -0.48
NcanP55066 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC12.08□□□□□ -0.48
NcanP55066 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
NcanP55066 AC192333.3-201ENSMUST00000224041 463 ntBASIC12.08□□□□□ -0.48
NcanP55066 Gal-201ENSMUST00000025842 712 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
NcanP55066 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
NcanP55066 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
NcanP55066 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
NcanP55066 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
NcanP55066 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
NcanP55066 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
NcanP55066 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
NcanP55066 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
NcanP55066 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
NcanP55066 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
NcanP55066 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
NcanP55066 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.08□□□□□ -0.48
NcanP55066 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
NcanP55066 Oprm1-213ENSMUST00000105604 1616 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
NcanP55066 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
NcanP55066 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC12.07□□□□□ -0.48
NcanP55066 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NcanP55066 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.07□□□□□ -0.48
NcanP55066 Araf-202ENSMUST00000120356 1520 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
NcanP55066 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NcanP55066 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
NcanP55066 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NcanP55066 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NcanP55066 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NcanP55066 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
NcanP55066 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NcanP55066 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
NcanP55066 Gm14021-201ENSMUST00000117683 961 ntBASIC12.07□□□□□ -0.48
NcanP55066 Efna1-203ENSMUST00000118860 1403 ntTSL 5 BASIC12.07□□□□□ -0.48
NcanP55066 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
NcanP55066 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC12.07□□□□□ -0.48
NcanP55066 Mir1941-201ENSMUST00000157834 83 ntBASIC12.07□□□□□ -0.48
NcanP55066 Gm17225-201ENSMUST00000172051 497 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
NcanP55066 Gm4705-201ENSMUST00000177415 354 ntBASIC12.07□□□□□ -0.48
NcanP55066 Gm5808-201ENSMUST00000178090 357 ntBASIC12.07□□□□□ -0.48
NcanP55066 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
NcanP55066 Gm28180-201ENSMUST00000189608 722 ntBASIC12.07□□□□□ -0.48
NcanP55066 Gm40332-201ENSMUST00000199847 938 ntBASIC12.07□□□□□ -0.48
NcanP55066 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC12.07□□□□□ -0.48
NcanP55066 Gm5291-201ENSMUST00000201965 899 ntBASIC12.07□□□□□ -0.48
NcanP55066 Gm6794-201ENSMUST00000203829 457 ntBASIC12.07□□□□□ -0.48
NcanP55066 Gm32786-201ENSMUST00000211351 628 ntTSL 3 BASIC12.07□□□□□ -0.48
NcanP55066 AC164614.1-201ENSMUST00000216038 397 ntBASIC12.07□□□□□ -0.48
NcanP55066 AC158518.1-201ENSMUST00000216435 320 ntTSL 5 BASIC12.07□□□□□ -0.48
NcanP55066 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
NcanP55066 Fibp-205ENSMUST00000225141 1209 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
NcanP55066 CT030195.2-201ENSMUST00000226074 1286 ntBASIC12.07□□□□□ -0.48
NcanP55066 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
NcanP55066 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NcanP55066 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
NcanP55066 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NcanP55066 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
NcanP55066 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.07□□□□□ -0.48
NcanP55066 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
NcanP55066 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.07□□□□□ -0.48
NcanP55066 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NcanP55066 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NcanP55066 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NcanP55066 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
NcanP55066 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
NcanP55066 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms