Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
NrlP54846 Gm8436-201ENSMUST00000210152 1080 ntBASIC12.24□□□□□ -0.45
NrlP54846 Gm5749-201ENSMUST00000210673 1090 ntBASIC12.24□□□□□ -0.45
NrlP54846 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC12.24□□□□□ -0.45
NrlP54846 CT030170.2-201ENSMUST00000223267 126 ntBASIC12.24□□□□□ -0.45
NrlP54846 AC122346.3-201ENSMUST00000223983 306 ntBASIC12.24□□□□□ -0.45
NrlP54846 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
NrlP54846 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
NrlP54846 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
NrlP54846 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
NrlP54846 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
NrlP54846 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
NrlP54846 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.24□□□□□ -0.45
NrlP54846 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
NrlP54846 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
NrlP54846 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
NrlP54846 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
NrlP54846 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
NrlP54846 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
NrlP54846 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
NrlP54846 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
NrlP54846 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
NrlP54846 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
NrlP54846 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
NrlP54846 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
NrlP54846 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
NrlP54846 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
NrlP54846 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NrlP54846 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.23□□□□□ -0.45
NrlP54846 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
NrlP54846 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
NrlP54846 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.23□□□□□ -0.45
NrlP54846 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
NrlP54846 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NrlP54846 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NrlP54846 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
NrlP54846 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NrlP54846 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NrlP54846 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC12.23□□□□□ -0.45
NrlP54846 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
NrlP54846 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
NrlP54846 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
NrlP54846 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
NrlP54846 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC12.23□□□□□ -0.45
NrlP54846 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
NrlP54846 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC12.23□□□□□ -0.45
NrlP54846 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NrlP54846 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
NrlP54846 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
NrlP54846 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
NrlP54846 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NrlP54846 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NrlP54846 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
NrlP54846 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NrlP54846 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NrlP54846 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
NrlP54846 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
NrlP54846 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NrlP54846 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
NrlP54846 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NrlP54846 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
NrlP54846 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NrlP54846 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NrlP54846 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
NrlP54846 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
NrlP54846 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.22□□□□□ -0.45
NrlP54846 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NrlP54846 Gm18642-201ENSMUST00000206642 1400 ntBASIC12.22□□□□□ -0.45
NrlP54846 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NrlP54846 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NrlP54846 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
NrlP54846 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NrlP54846 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NrlP54846 Gm12816-201ENSMUST00000118069 1212 ntBASIC12.22□□□□□ -0.45
NrlP54846 Gm14270-201ENSMUST00000118388 846 ntBASIC12.22□□□□□ -0.45
NrlP54846 Gm12274-201ENSMUST00000120062 385 ntBASIC12.22□□□□□ -0.45
NrlP54846 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
NrlP54846 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC12.22□□□□□ -0.45
NrlP54846 Ighv2-1-201ENSMUST00000170946 353 ntBASIC12.22□□□□□ -0.45
NrlP54846 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
NrlP54846 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC12.22□□□□□ -0.45
NrlP54846 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NrlP54846 Gm10263-201ENSMUST00000085163 300 ntBASIC12.22□□□□□ -0.45
NrlP54846 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
NrlP54846 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
NrlP54846 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NrlP54846 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC12.22□□□□□ -0.45
NrlP54846 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NrlP54846 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NrlP54846 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NrlP54846 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
NrlP54846 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC12.22□□□□□ -0.45
NrlP54846 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
NrlP54846 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.22□□□□□ -0.45
NrlP54846 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
NrlP54846 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
NrlP54846 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NrlP54846 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
NrlP54846 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
NrlP54846 Gm15784-201ENSMUST00000120260 1462 ntBASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms