Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxd8P23463 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxd8P23463 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxd8P23463 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxd8P23463 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxd8P23463 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxd8P23463 Gm6024-201ENSMUST00000117850 1558 ntBASIC11.92□□□□□ -0.5
Hoxd8P23463 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxd8P23463 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxd8P23463 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxd8P23463 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxd8P23463 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxd8P23463 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.92□□□□□ -0.5
Hoxd8P23463 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Hoxd8P23463 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.92□□□□□ -0.5
Hoxd8P23463 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxd8P23463 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Hoxd8P23463 Gm14398-201ENSMUST00000117287 1073 ntBASIC11.92□□□□□ -0.5
Hoxd8P23463 Gm12783-201ENSMUST00000121425 397 ntBASIC11.92□□□□□ -0.5
Hoxd8P23463 Gm22146-201ENSMUST00000157397 288 ntBASIC11.92□□□□□ -0.5
Hoxd8P23463 Gm24809-201ENSMUST00000175318 271 ntBASIC11.92□□□□□ -0.5
Hoxd8P23463 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxd8P23463 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxd8P23463 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC11.92□□□□□ -0.5
Hoxd8P23463 Gm29107-201ENSMUST00000190910 347 ntBASIC11.92□□□□□ -0.5
Hoxd8P23463 Gm38018-201ENSMUST00000195651 540 ntBASIC11.92□□□□□ -0.5
Hoxd8P23463 Gm42655-201ENSMUST00000202782 1134 ntBASIC11.92□□□□□ -0.5
Hoxd8P23463 Gm43974-201ENSMUST00000205080 684 ntBASIC11.92□□□□□ -0.5
Hoxd8P23463 Cdkn3-201ENSMUST00000067426 917 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxd8P23463 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC11.92□□□□□ -0.5
Hoxd8P23463 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxd8P23463 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxd8P23463 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxd8P23463 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxd8P23463 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxd8P23463 Gm18829-201ENSMUST00000188150 1622 ntBASIC11.92□□□□□ -0.5
Hoxd8P23463 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxd8P23463 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxd8P23463 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxd8P23463 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC11.92□□□□□ -0.5
Hoxd8P23463 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxd8P23463 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC11.92□□□□□ -0.5
Hoxd8P23463 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Hoxd8P23463 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxd8P23463 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.91□□□□□ -0.5
Hoxd8P23463 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxd8P23463 Gm44286-201ENSMUST00000204098 1487 ntBASIC11.91□□□□□ -0.5
Hoxd8P23463 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxd8P23463 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxd8P23463 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxd8P23463 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxd8P23463 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxd8P23463 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxd8P23463 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxd8P23463 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxd8P23463 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxd8P23463 Gm13351-201ENSMUST00000118087 414 ntBASIC11.91□□□□□ -0.5
Hoxd8P23463 Gm9133-201ENSMUST00000118289 540 ntBASIC11.91□□□□□ -0.5
Hoxd8P23463 Gm12179-201ENSMUST00000118344 1272 ntBASIC11.91□□□□□ -0.5
Hoxd8P23463 Gm12752-201ENSMUST00000121657 811 ntBASIC11.91□□□□□ -0.5
Hoxd8P23463 Gm12246-201ENSMUST00000129126 503 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxd8P23463 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxd8P23463 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxd8P23463 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC11.91□□□□□ -0.5
Hoxd8P23463 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxd8P23463 Mrip-ps-201ENSMUST00000184613 940 ntBASIC11.91□□□□□ -0.5
Hoxd8P23463 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC11.91□□□□□ -0.5
Hoxd8P23463 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxd8P23463 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxd8P23463 Gm39375-201ENSMUST00000217068 1039 ntTSL 5 BASIC11.91□□□□□ -0.5
Hoxd8P23463 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC11.91□□□□□ -0.5
Hoxd8P23463 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC11.91□□□□□ -0.5
Hoxd8P23463 AC158392.3-201ENSMUST00000224271 1284 ntBASIC11.91□□□□□ -0.5
Hoxd8P23463 CT030135.2-201ENSMUST00000225255 893 ntBASIC11.91□□□□□ -0.5
Hoxd8P23463 AC154305.2-201ENSMUST00000225813 901 ntBASIC11.91□□□□□ -0.5
Hoxd8P23463 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxd8P23463 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Hoxd8P23463 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxd8P23463 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxd8P23463 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxd8P23463 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Hoxd8P23463 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Hoxd8P23463 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxd8P23463 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.91□□□□□ -0.5
Hoxd8P23463 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.91□□□□□ -0.5
Hoxd8P23463 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxd8P23463 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Hoxd8P23463 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxd8P23463 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxd8P23463 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxd8P23463 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxd8P23463 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Hoxd8P23463 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Hoxd8P23463 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxd8P23463 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.9□□□□□ -0.5
Hoxd8P23463 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxd8P23463 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxd8P23463 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxd8P23463 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxd8P23463 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms