Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Hcn1O88704 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Hcn1O88704 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.64
Hcn1O88704 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Hcn1O88704 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.02□□□□□ -0.64
Hcn1O88704 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Hcn1O88704 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.02□□□□□ -0.64
Hcn1O88704 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.02□□□□□ -0.64
Hcn1O88704 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Hcn1O88704 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Hcn1O88704 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hcn1O88704 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC11.02□□□□□ -0.65
Hcn1O88704 Gm12036-201ENSMUST00000120008 530 ntBASIC11.02□□□□□ -0.65
Hcn1O88704 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.02□□□□□ -0.65
Hcn1O88704 Gm18734-201ENSMUST00000172937 808 ntBASIC11.02□□□□□ -0.65
Hcn1O88704 Mir5120-201ENSMUST00000175020 78 ntBASIC11.02□□□□□ -0.65
Hcn1O88704 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.02□□□□□ -0.65
Hcn1O88704 Gm807-202ENSMUST00000224929 408 ntBASIC11.02□□□□□ -0.65
Hcn1O88704 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.02□□□□□ -0.65
Hcn1O88704 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hcn1O88704 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hcn1O88704 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hcn1O88704 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.02□□□□□ -0.65
Hcn1O88704 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Hcn1O88704 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hcn1O88704 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC11.02□□□□□ -0.65
Hcn1O88704 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Hcn1O88704 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hcn1O88704 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
Hcn1O88704 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Hcn1O88704 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Hcn1O88704 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Hcn1O88704 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hcn1O88704 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hcn1O88704 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.02□□□□□ -0.65
Hcn1O88704 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Hcn1O88704 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hcn1O88704 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.65
Hcn1O88704 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hcn1O88704 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hcn1O88704 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hcn1O88704 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hcn1O88704 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Hcn1O88704 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hcn1O88704 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Hcn1O88704 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hcn1O88704 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hcn1O88704 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Hcn1O88704 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hcn1O88704 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.01□□□□□ -0.65
Hcn1O88704 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Hcn1O88704 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.01□□□□□ -0.65
Hcn1O88704 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hcn1O88704 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hcn1O88704 Gm15515-201ENSMUST00000117827 822 ntBASIC11.01□□□□□ -0.65
Hcn1O88704 Gm12196-201ENSMUST00000120954 262 ntBASIC11.01□□□□□ -0.65
Hcn1O88704 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Hcn1O88704 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hcn1O88704 Mir5132-201ENSMUST00000175166 71 ntBASIC11.01□□□□□ -0.65
Hcn1O88704 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.01□□□□□ -0.65
Hcn1O88704 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC11.01□□□□□ -0.65
Hcn1O88704 Gm3332-201ENSMUST00000189337 928 ntBASIC11.01□□□□□ -0.65
Hcn1O88704 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC11.01□□□□□ -0.65
Hcn1O88704 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hcn1O88704 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Hcn1O88704 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.01□□□□□ -0.65
Hcn1O88704 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.01□□□□□ -0.65
Hcn1O88704 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hcn1O88704 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Hcn1O88704 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.01□□□□□ -0.65
Hcn1O88704 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Hcn1O88704 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hcn1O88704 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
Hcn1O88704 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hcn1O88704 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hcn1O88704 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hcn1O88704 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.01□□□□□ -0.65
Hcn1O88704 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hcn1O88704 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.01□□□□□ -0.65
Hcn1O88704 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC11.01□□□□□ -0.65
Hcn1O88704 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hcn1O88704 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Hcn1O88704 Gm45206-201ENSMUST00000206885 2285 ntBASIC11.01□□□□□ -0.65
Hcn1O88704 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC11.01□□□□□ -0.65
Hcn1O88704 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Hcn1O88704 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC11.01□□□□□ -0.65
Hcn1O88704 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hcn1O88704 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Hcn1O88704 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Hcn1O88704 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Hcn1O88704 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hcn1O88704 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hcn1O88704 Rgr-203ENSMUST00000225070 4704 ntBASIC11□□□□□ -0.65
Hcn1O88704 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hcn1O88704 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hcn1O88704 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hcn1O88704 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hcn1O88704 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hcn1O88704 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC11□□□□□ -0.65
Hcn1O88704 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms