Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim30cD3YVI9 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim30cD3YVI9 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim30cD3YVI9 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trim30cD3YVI9 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim30cD3YVI9 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC12.63□□□□□ -0.39
Trim30cD3YVI9 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim30cD3YVI9 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim30cD3YVI9 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Trim30cD3YVI9 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim30cD3YVI9 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.63□□□□□ -0.39
Trim30cD3YVI9 Gm14028-201ENSMUST00000117434 479 ntBASIC12.63□□□□□ -0.39
Trim30cD3YVI9 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.63□□□□□ -0.39
Trim30cD3YVI9 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.63□□□□□ -0.39
Trim30cD3YVI9 Gm24749-201ENSMUST00000157838 343 ntBASIC12.63□□□□□ -0.39
Trim30cD3YVI9 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.63□□□□□ -0.39
Trim30cD3YVI9 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim30cD3YVI9 Gm29615-201ENSMUST00000185371 697 ntBASIC12.63□□□□□ -0.39
Trim30cD3YVI9 Gm28224-201ENSMUST00000186078 697 ntBASIC12.63□□□□□ -0.39
Trim30cD3YVI9 Gm29001-201ENSMUST00000186177 697 ntBASIC12.63□□□□□ -0.39
Trim30cD3YVI9 Gm28292-201ENSMUST00000186593 697 ntBASIC12.63□□□□□ -0.39
Trim30cD3YVI9 Gm28101-201ENSMUST00000187608 697 ntBASIC12.63□□□□□ -0.39
Trim30cD3YVI9 Gm29076-201ENSMUST00000187689 697 ntBASIC12.63□□□□□ -0.39
Trim30cD3YVI9 Gm28302-201ENSMUST00000187931 697 ntBASIC12.63□□□□□ -0.39
Trim30cD3YVI9 Gm28646-201ENSMUST00000188220 697 ntBASIC12.63□□□□□ -0.39
Trim30cD3YVI9 Gm28205-201ENSMUST00000189177 697 ntBASIC12.63□□□□□ -0.39
Trim30cD3YVI9 Gm29032-201ENSMUST00000189797 697 ntBASIC12.63□□□□□ -0.39
Trim30cD3YVI9 Gm28695-201ENSMUST00000190300 697 ntBASIC12.63□□□□□ -0.39
Trim30cD3YVI9 Gm37448-201ENSMUST00000192795 697 ntBASIC12.63□□□□□ -0.39
Trim30cD3YVI9 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.63□□□□□ -0.39
Trim30cD3YVI9 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.63□□□□□ -0.39
Trim30cD3YVI9 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim30cD3YVI9 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim30cD3YVI9 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim30cD3YVI9 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.63□□□□□ -0.39
Trim30cD3YVI9 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim30cD3YVI9 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim30cD3YVI9 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim30cD3YVI9 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim30cD3YVI9 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim30cD3YVI9 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim30cD3YVI9 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim30cD3YVI9 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim30cD3YVI9 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim30cD3YVI9 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim30cD3YVI9 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim30cD3YVI9 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim30cD3YVI9 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.63□□□□□ -0.39
Trim30cD3YVI9 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim30cD3YVI9 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trim30cD3YVI9 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Trim30cD3YVI9 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Trim30cD3YVI9 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC12.62□□□□□ -0.39
Trim30cD3YVI9 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim30cD3YVI9 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim30cD3YVI9 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim30cD3YVI9 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim30cD3YVI9 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.62□□□□□ -0.39
Trim30cD3YVI9 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Trim30cD3YVI9 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim30cD3YVI9 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC12.62□□□□□ -0.39
Trim30cD3YVI9 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trim30cD3YVI9 Tbata-209ENSMUST00000148181 1017 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim30cD3YVI9 Gm27627-201ENSMUST00000183644 150 ntBASIC12.62□□□□□ -0.39
Trim30cD3YVI9 Gm4034-201ENSMUST00000187674 480 ntBASIC12.62□□□□□ -0.39
Trim30cD3YVI9 Gm37466-201ENSMUST00000195692 652 ntBASIC12.62□□□□□ -0.39
Trim30cD3YVI9 Gm19080-201ENSMUST00000196082 550 ntBASIC12.62□□□□□ -0.39
Trim30cD3YVI9 Gm44136-201ENSMUST00000203819 1106 ntBASIC12.62□□□□□ -0.39
Trim30cD3YVI9 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trim30cD3YVI9 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim30cD3YVI9 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.62□□□□□ -0.39
Trim30cD3YVI9 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim30cD3YVI9 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim30cD3YVI9 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim30cD3YVI9 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim30cD3YVI9 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim30cD3YVI9 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim30cD3YVI9 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim30cD3YVI9 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim30cD3YVI9 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim30cD3YVI9 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim30cD3YVI9 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim30cD3YVI9 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trim30cD3YVI9 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trim30cD3YVI9 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim30cD3YVI9 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim30cD3YVI9 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trim30cD3YVI9 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.61□□□□□ -0.39
Trim30cD3YVI9 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim30cD3YVI9 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim30cD3YVI9 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim30cD3YVI9 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.61□□□□□ -0.39
Trim30cD3YVI9 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.61□□□□□ -0.39
Trim30cD3YVI9 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim30cD3YVI9 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim30cD3YVI9 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trim30cD3YVI9 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim30cD3YVI9 Gm9723-201ENSMUST00000192100 457 ntBASIC12.61□□□□□ -0.39
Trim30cD3YVI9 Gm37666-201ENSMUST00000194110 866 ntBASIC12.61□□□□□ -0.39
Trim30cD3YVI9 Gm44270-201ENSMUST00000203084 1234 ntBASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms