Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Gm1840-201ENSMUST00000051687 1432 ntBASIC9.24□□□□□ -0.93
Chd6A3KFM7 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Chd6A3KFM7 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Chd6A3KFM7 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Chd6A3KFM7 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Chd6A3KFM7 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Chd6A3KFM7 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Chd6A3KFM7 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Chd6A3KFM7 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Chd6A3KFM7 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Chd6A3KFM7 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Chd6A3KFM7 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Chd6A3KFM7 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Chd6A3KFM7 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Chd6A3KFM7 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Chd6A3KFM7 Mir675-201ENSMUST00000102320 84 ntBASIC9.24□□□□□ -0.93
Chd6A3KFM7 Gng12-207ENSMUST00000114228 748 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Chd6A3KFM7 Gm12745-201ENSMUST00000121767 214 ntBASIC9.24□□□□□ -0.93
Chd6A3KFM7 Gm24597-201ENSMUST00000122503 300 ntBASIC9.24□□□□□ -0.93
Chd6A3KFM7 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC9.24□□□□□ -0.93
Chd6A3KFM7 Bcas1os2-201ENSMUST00000131931 1174 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Chd6A3KFM7 Baat-202ENSMUST00000166036 1263 ntAPPRIS P1 TSL 3 BASIC9.24□□□□□ -0.93
Chd6A3KFM7 Arpp19-207ENSMUST00000169188 216 ntTSL 5 BASIC9.24□□□□□ -0.93
Chd6A3KFM7 1700012J22Rik-201ENSMUST00000193492 830 ntBASIC9.24□□□□□ -0.93
Chd6A3KFM7 Gm44460-201ENSMUST00000196179 129 ntBASIC9.24□□□□□ -0.93
Chd6A3KFM7 Ift22-204ENSMUST00000200153 670 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Chd6A3KFM7 Calb2-202ENSMUST00000212297 1080 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Chd6A3KFM7 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Chd6A3KFM7 Gm29100-201ENSMUST00000187564 4410 ntBASIC9.24□□□□□ -0.93
Chd6A3KFM7 Gm45199-201ENSMUST00000207640 1507 ntBASIC9.24□□□□□ -0.93
Chd6A3KFM7 AC126257.1-201ENSMUST00000213195 1536 ntBASIC9.24□□□□□ -0.93
Chd6A3KFM7 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Chd6A3KFM7 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Chd6A3KFM7 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Chd6A3KFM7 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Chd6A3KFM7 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC9.24□□□□□ -0.93
Chd6A3KFM7 Cep70-207ENSMUST00000190715 1768 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Chd6A3KFM7 Gm45706-201ENSMUST00000213063 2136 ntBASIC9.24□□□□□ -0.93
Chd6A3KFM7 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Chd6A3KFM7 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC9.24□□□□□ -0.93
Chd6A3KFM7 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Chd6A3KFM7 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Chd6A3KFM7 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Chd6A3KFM7 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Chd6A3KFM7 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Chd6A3KFM7 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Chd6A3KFM7 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC9.24□□□□□ -0.93
Chd6A3KFM7 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Chd6A3KFM7 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Chd6A3KFM7 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Chd6A3KFM7 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Chd6A3KFM7 Galntl5-201ENSMUST00000030778 1627 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Chd6A3KFM7 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Chd6A3KFM7 Olfr62-201ENSMUST00000102666 949 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Chd6A3KFM7 Gm6238-201ENSMUST00000120999 465 ntBASIC9.24□□□□□ -0.93
Chd6A3KFM7 Gm23916-201ENSMUST00000158484 399 ntBASIC9.24□□□□□ -0.93
Chd6A3KFM7 Mok-204ENSMUST00000177224 551 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Chd6A3KFM7 Gm9117-201ENSMUST00000177735 1098 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Chd6A3KFM7 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Chd6A3KFM7 Gm18014-201ENSMUST00000183369 817 ntBASIC9.24□□□□□ -0.93
Chd6A3KFM7 Gm21149-201ENSMUST00000197995 1212 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Chd6A3KFM7 Gm44236-201ENSMUST00000204492 513 ntBASIC9.24□□□□□ -0.93
Chd6A3KFM7 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC9.24□□□□□ -0.93
Chd6A3KFM7 Gm34237-201ENSMUST00000220575 1257 ntTSL 5 BASIC9.24□□□□□ -0.93
Chd6A3KFM7 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Chd6A3KFM7 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Chd6A3KFM7 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Chd6A3KFM7 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Chd6A3KFM7 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Chd6A3KFM7 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Chd6A3KFM7 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC9.23□□□□□ -0.93
Chd6A3KFM7 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC9.23□□□□□ -0.93
Chd6A3KFM7 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Chd6A3KFM7 Uros-204ENSMUST00000106146 1483 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Chd6A3KFM7 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Chd6A3KFM7 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Chd6A3KFM7 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Chd6A3KFM7 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Chd6A3KFM7 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC9.23□□□□□ -0.93
Chd6A3KFM7 AC116596.1-201ENSMUST00000228112 1762 ntBASIC9.23□□□□□ -0.93
Chd6A3KFM7 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
Chd6A3KFM7 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Chd6A3KFM7 Gabarap-202ENSMUST00000108592 750 ntTSL 3 BASIC9.23□□□□□ -0.93
Chd6A3KFM7 Gm14571-201ENSMUST00000118292 570 ntBASIC9.23□□□□□ -0.93
Chd6A3KFM7 Gm12679-201ENSMUST00000123899 636 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Chd6A3KFM7 Gm34342-201ENSMUST00000192139 335 ntTSL 3 BASIC9.23□□□□□ -0.93
Chd6A3KFM7 Gm37622-201ENSMUST00000192162 285 ntTSL 5 BASIC9.23□□□□□ -0.93
Chd6A3KFM7 Gm44159-201ENSMUST00000204065 442 ntBASIC9.23□□□□□ -0.93
Chd6A3KFM7 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Chd6A3KFM7 AC122824.1-201ENSMUST00000221705 828 ntTSL 3 BASIC9.23□□□□□ -0.93
Chd6A3KFM7 Gm9531-201ENSMUST00000055820 638 ntTSL 3 BASIC9.23□□□□□ -0.93
Chd6A3KFM7 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Chd6A3KFM7 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Chd6A3KFM7 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Chd6A3KFM7 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC9.23□□□□□ -0.93
Chd6A3KFM7 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Chd6A3KFM7 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Chd6A3KFM7 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Chd6A3KFM7 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Chd6A3KFM7 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms