Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trim39Q9ESN2 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trim39Q9ESN2 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC10.88□□□□□ -0.67
Trim39Q9ESN2 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Trim39Q9ESN2 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trim39Q9ESN2 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trim39Q9ESN2 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trim39Q9ESN2 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Trim39Q9ESN2 AC129336.2-201ENSMUST00000218053 3086 ntBASIC10.88□□□□□ -0.67
Trim39Q9ESN2 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
Trim39Q9ESN2 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trim39Q9ESN2 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Trim39Q9ESN2 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trim39Q9ESN2 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim39Q9ESN2 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim39Q9ESN2 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim39Q9ESN2 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim39Q9ESN2 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Trim39Q9ESN2 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trim39Q9ESN2 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim39Q9ESN2 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Trim39Q9ESN2 Map4-204ENSMUST00000164930 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim39Q9ESN2 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim39Q9ESN2 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim39Q9ESN2 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trim39Q9ESN2 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim39Q9ESN2 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim39Q9ESN2 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim39Q9ESN2 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Trim39Q9ESN2 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim39Q9ESN2 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim39Q9ESN2 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trim39Q9ESN2 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim39Q9ESN2 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Trim39Q9ESN2 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trim39Q9ESN2 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC10.87□□□□□ -0.67
Trim39Q9ESN2 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC10.87□□□□□ -0.67
Trim39Q9ESN2 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trim39Q9ESN2 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC10.87□□□□□ -0.67
Trim39Q9ESN2 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trim39Q9ESN2 Gm9230-201ENSMUST00000188228 532 ntBASIC10.87□□□□□ -0.67
Trim39Q9ESN2 Gm7783-201ENSMUST00000204795 781 ntBASIC10.87□□□□□ -0.67
Trim39Q9ESN2 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trim39Q9ESN2 Gm45071-201ENSMUST00000205353 571 ntBASIC10.87□□□□□ -0.67
Trim39Q9ESN2 AC161537.1-201ENSMUST00000226199 1015 ntBASIC10.87□□□□□ -0.67
Trim39Q9ESN2 Rpp30-201ENSMUST00000025714 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim39Q9ESN2 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim39Q9ESN2 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC10.87□□□□□ -0.67
Trim39Q9ESN2 CT009713.5-203ENSMUST00000224218 2079 ntBASIC10.87□□□□□ -0.67
Trim39Q9ESN2 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim39Q9ESN2 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim39Q9ESN2 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Trim39Q9ESN2 Gm43447-201ENSMUST00000198471 1535 ntBASIC10.87□□□□□ -0.67
Trim39Q9ESN2 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trim39Q9ESN2 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim39Q9ESN2 AC126444.1-201ENSMUST00000225938 1768 ntBASIC10.87□□□□□ -0.67
Trim39Q9ESN2 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim39Q9ESN2 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC10.87□□□□□ -0.67
Trim39Q9ESN2 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim39Q9ESN2 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim39Q9ESN2 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim39Q9ESN2 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim39Q9ESN2 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim39Q9ESN2 Pla2g5-201ENSMUST00000030524 2131 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim39Q9ESN2 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim39Q9ESN2 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trim39Q9ESN2 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim39Q9ESN2 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC10.87□□□□□ -0.67
Trim39Q9ESN2 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim39Q9ESN2 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trim39Q9ESN2 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim39Q9ESN2 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC10.86□□□□□ -0.67
Trim39Q9ESN2 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim39Q9ESN2 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim39Q9ESN2 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC10.86□□□□□ -0.67
Trim39Q9ESN2 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim39Q9ESN2 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Trim39Q9ESN2 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim39Q9ESN2 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trim39Q9ESN2 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trim39Q9ESN2 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC10.86□□□□□ -0.67
Trim39Q9ESN2 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trim39Q9ESN2 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trim39Q9ESN2 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim39Q9ESN2 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim39Q9ESN2 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
Trim39Q9ESN2 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Trim39Q9ESN2 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Trim39Q9ESN2 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim39Q9ESN2 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim39Q9ESN2 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim39Q9ESN2 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trim39Q9ESN2 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim39Q9ESN2 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trim39Q9ESN2 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Trim39Q9ESN2 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Trim39Q9ESN2 Gm24255-201ENSMUST00000104481 128 ntBASIC10.86□□□□□ -0.67
Trim39Q9ESN2 Gm12015-201ENSMUST00000117065 843 ntBASIC10.86□□□□□ -0.67
Trim39Q9ESN2 Gm11989-201ENSMUST00000117240 672 ntBASIC10.86□□□□□ -0.67
Trim39Q9ESN2 Gm11362-201ENSMUST00000118838 850 ntBASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms