Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Btrc-209ENSMUST00000224478 2194 ntBASIC11.27□□□□□ -0.6
Trim16Q99PP9 Smad9-201ENSMUST00000029371 5368 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trim16Q99PP9 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trim16Q99PP9 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trim16Q99PP9 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC11.27□□□□□ -0.6
Trim16Q99PP9 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.27□□□□□ -0.61
Trim16Q99PP9 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim16Q99PP9 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Trim16Q99PP9 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim16Q99PP9 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim16Q99PP9 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trim16Q99PP9 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim16Q99PP9 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trim16Q99PP9 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trim16Q99PP9 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trim16Q99PP9 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim16Q99PP9 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.27□□□□□ -0.61
Trim16Q99PP9 Gm15004-201ENSMUST00000119192 630 ntBASIC11.27□□□□□ -0.61
Trim16Q99PP9 Gm14277-201ENSMUST00000121195 360 ntBASIC11.27□□□□□ -0.61
Trim16Q99PP9 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trim16Q99PP9 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC11.27□□□□□ -0.61
Trim16Q99PP9 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC11.27□□□□□ -0.61
Trim16Q99PP9 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Trim16Q99PP9 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.27□□□□□ -0.61
Trim16Q99PP9 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.27□□□□□ -0.61
Trim16Q99PP9 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.27□□□□□ -0.61
Trim16Q99PP9 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
Trim16Q99PP9 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.27□□□□□ -0.61
Trim16Q99PP9 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trim16Q99PP9 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Trim16Q99PP9 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC11.27□□□□□ -0.61
Trim16Q99PP9 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim16Q99PP9 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trim16Q99PP9 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trim16Q99PP9 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim16Q99PP9 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim16Q99PP9 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trim16Q99PP9 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC11.27□□□□□ -0.61
Trim16Q99PP9 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim16Q99PP9 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Trim16Q99PP9 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim16Q99PP9 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim16Q99PP9 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Trim16Q99PP9 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
Trim16Q99PP9 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim16Q99PP9 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim16Q99PP9 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trim16Q99PP9 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim16Q99PP9 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Trim16Q99PP9 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim16Q99PP9 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim16Q99PP9 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim16Q99PP9 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim16Q99PP9 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim16Q99PP9 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim16Q99PP9 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC11.26□□□□□ -0.61
Trim16Q99PP9 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim16Q99PP9 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim16Q99PP9 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim16Q99PP9 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.26□□□□□ -0.61
Trim16Q99PP9 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim16Q99PP9 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim16Q99PP9 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim16Q99PP9 Atg2a-201ENSMUST00000045351 6371 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim16Q99PP9 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim16Q99PP9 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim16Q99PP9 AC123738.2-201ENSMUST00000223791 1899 ntBASIC11.26□□□□□ -0.61
Trim16Q99PP9 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim16Q99PP9 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Trim16Q99PP9 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim16Q99PP9 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim16Q99PP9 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC11.26□□□□□ -0.61
Trim16Q99PP9 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC11.26□□□□□ -0.61
Trim16Q99PP9 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim16Q99PP9 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.26□□□□□ -0.61
Trim16Q99PP9 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim16Q99PP9 Gm8343-201ENSMUST00000182705 994 ntBASIC11.26□□□□□ -0.61
Trim16Q99PP9 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim16Q99PP9 Gm18038-201ENSMUST00000197900 485 ntBASIC11.26□□□□□ -0.61
Trim16Q99PP9 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC11.26□□□□□ -0.61
Trim16Q99PP9 Gm4157-201ENSMUST00000211647 679 ntBASIC11.26□□□□□ -0.61
Trim16Q99PP9 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC11.26□□□□□ -0.61
Trim16Q99PP9 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.26□□□□□ -0.61
Trim16Q99PP9 AC159747.1-201ENSMUST00000219903 265 ntBASIC11.26□□□□□ -0.61
Trim16Q99PP9 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.26□□□□□ -0.61
Trim16Q99PP9 Gm270-201ENSMUST00000223010 976 ntBASIC11.26□□□□□ -0.61
Trim16Q99PP9 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim16Q99PP9 Gm5705-201ENSMUST00000066241 711 ntBASIC11.26□□□□□ -0.61
Trim16Q99PP9 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim16Q99PP9 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Trim16Q99PP9 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim16Q99PP9 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim16Q99PP9 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim16Q99PP9 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim16Q99PP9 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim16Q99PP9 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
Trim16Q99PP9 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim16Q99PP9 Cacna1e-207ENSMUST00000211821 6765 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trim16Q99PP9 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Trim16Q99PP9 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms