Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Sh3rf2Q8BZT2 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sh3rf2Q8BZT2 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Sh3rf2Q8BZT2 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.66□□□□□ -0.54
Sh3rf2Q8BZT2 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sh3rf2Q8BZT2 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Sh3rf2Q8BZT2 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sh3rf2Q8BZT2 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sh3rf2Q8BZT2 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Sh3rf2Q8BZT2 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sh3rf2Q8BZT2 Gm8899-201ENSMUST00000214635 1332 ntBASIC11.66□□□□□ -0.54
Sh3rf2Q8BZT2 Gm38194-201ENSMUST00000194529 2211 ntBASIC11.66□□□□□ -0.54
Sh3rf2Q8BZT2 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sh3rf2Q8BZT2 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sh3rf2Q8BZT2 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sh3rf2Q8BZT2 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Sh3rf2Q8BZT2 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sh3rf2Q8BZT2 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sh3rf2Q8BZT2 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Sh3rf2Q8BZT2 Gm8111-201ENSMUST00000117659 987 ntBASIC11.66□□□□□ -0.54
Sh3rf2Q8BZT2 Gm13117-201ENSMUST00000120894 691 ntBASIC11.66□□□□□ -0.54
Sh3rf2Q8BZT2 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC11.66□□□□□ -0.54
Sh3rf2Q8BZT2 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC11.66□□□□□ -0.54
Sh3rf2Q8BZT2 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC11.66□□□□□ -0.54
Sh3rf2Q8BZT2 Mir7051-201ENSMUST00000184167 73 ntBASIC11.66□□□□□ -0.54
Sh3rf2Q8BZT2 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sh3rf2Q8BZT2 Gm43163-201ENSMUST00000196571 442 ntBASIC11.66□□□□□ -0.54
Sh3rf2Q8BZT2 Gm42816-201ENSMUST00000198433 325 ntBASIC11.66□□□□□ -0.54
Sh3rf2Q8BZT2 Gm19091-201ENSMUST00000208120 978 ntBASIC11.66□□□□□ -0.54
Sh3rf2Q8BZT2 Gm45758-201ENSMUST00000212448 1006 ntBASIC11.66□□□□□ -0.54
Sh3rf2Q8BZT2 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC11.66□□□□□ -0.54
Sh3rf2Q8BZT2 CT010506.1-201ENSMUST00000223673 349 ntBASIC11.66□□□□□ -0.54
Sh3rf2Q8BZT2 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sh3rf2Q8BZT2 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sh3rf2Q8BZT2 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Sh3rf2Q8BZT2 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sh3rf2Q8BZT2 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sh3rf2Q8BZT2 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sh3rf2Q8BZT2 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sh3rf2Q8BZT2 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sh3rf2Q8BZT2 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sh3rf2Q8BZT2 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sh3rf2Q8BZT2 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC11.66□□□□□ -0.54
Sh3rf2Q8BZT2 Gm17213-201ENSMUST00000165161 1360 ntBASIC11.66□□□□□ -0.54
Sh3rf2Q8BZT2 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Sh3rf2Q8BZT2 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Sh3rf2Q8BZT2 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sh3rf2Q8BZT2 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sh3rf2Q8BZT2 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sh3rf2Q8BZT2 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sh3rf2Q8BZT2 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sh3rf2Q8BZT2 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sh3rf2Q8BZT2 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sh3rf2Q8BZT2 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sh3rf2Q8BZT2 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sh3rf2Q8BZT2 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sh3rf2Q8BZT2 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Sh3rf2Q8BZT2 Gm9415-201ENSMUST00000200462 1321 ntBASIC11.65□□□□□ -0.54
Sh3rf2Q8BZT2 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Sh3rf2Q8BZT2 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sh3rf2Q8BZT2 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Sh3rf2Q8BZT2 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sh3rf2Q8BZT2 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.65□□□□□ -0.54
Sh3rf2Q8BZT2 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sh3rf2Q8BZT2 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sh3rf2Q8BZT2 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC11.65□□□□□ -0.54
Sh3rf2Q8BZT2 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sh3rf2Q8BZT2 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sh3rf2Q8BZT2 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sh3rf2Q8BZT2 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC11.65□□□□□ -0.54
Sh3rf2Q8BZT2 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
Sh3rf2Q8BZT2 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC11.65□□□□□ -0.54
Sh3rf2Q8BZT2 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC11.65□□□□□ -0.54
Sh3rf2Q8BZT2 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC11.65□□□□□ -0.54
Sh3rf2Q8BZT2 AC099645.1-201ENSMUST00000226476 1105 ntBASIC11.65□□□□□ -0.54
Sh3rf2Q8BZT2 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Sh3rf2Q8BZT2 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sh3rf2Q8BZT2 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Sh3rf2Q8BZT2 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sh3rf2Q8BZT2 Gm3765-201ENSMUST00000130985 1447 ntBASIC11.65□□□□□ -0.54
Sh3rf2Q8BZT2 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Sh3rf2Q8BZT2 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sh3rf2Q8BZT2 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sh3rf2Q8BZT2 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sh3rf2Q8BZT2 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sh3rf2Q8BZT2 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sh3rf2Q8BZT2 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sh3rf2Q8BZT2 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sh3rf2Q8BZT2 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Sh3rf2Q8BZT2 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sh3rf2Q8BZT2 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sh3rf2Q8BZT2 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Sh3rf2Q8BZT2 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Sh3rf2Q8BZT2 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Sh3rf2Q8BZT2 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Sh3rf2Q8BZT2 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
Sh3rf2Q8BZT2 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sh3rf2Q8BZT2 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sh3rf2Q8BZT2 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sh3rf2Q8BZT2 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms