Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usp1Q8BJQ2 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.28□□□□□ -0.44
Usp1Q8BJQ2 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Usp1Q8BJQ2 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Usp1Q8BJQ2 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.28□□□□□ -0.44
Usp1Q8BJQ2 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usp1Q8BJQ2 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usp1Q8BJQ2 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Usp1Q8BJQ2 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usp1Q8BJQ2 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usp1Q8BJQ2 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usp1Q8BJQ2 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Usp1Q8BJQ2 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Usp1Q8BJQ2 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usp1Q8BJQ2 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usp1Q8BJQ2 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usp1Q8BJQ2 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Usp1Q8BJQ2 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usp1Q8BJQ2 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Usp1Q8BJQ2 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Usp1Q8BJQ2 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.28□□□□□ -0.44
Usp1Q8BJQ2 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usp1Q8BJQ2 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usp1Q8BJQ2 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC12.28□□□□□ -0.44
Usp1Q8BJQ2 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usp1Q8BJQ2 Gm20614-201ENSMUST00000177106 632 ntBASIC12.28□□□□□ -0.44
Usp1Q8BJQ2 Gm7741-201ENSMUST00000181445 989 ntBASIC12.28□□□□□ -0.44
Usp1Q8BJQ2 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Usp1Q8BJQ2 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC12.28□□□□□ -0.44
Usp1Q8BJQ2 Gm5100-201ENSMUST00000195631 589 ntBASIC12.28□□□□□ -0.44
Usp1Q8BJQ2 Gm19166-201ENSMUST00000196041 1063 ntBASIC12.28□□□□□ -0.44
Usp1Q8BJQ2 Gm5982-201ENSMUST00000196234 512 ntBASIC12.28□□□□□ -0.44
Usp1Q8BJQ2 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usp1Q8BJQ2 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC12.28□□□□□ -0.44
Usp1Q8BJQ2 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC12.28□□□□□ -0.44
Usp1Q8BJQ2 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usp1Q8BJQ2 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usp1Q8BJQ2 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Usp1Q8BJQ2 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usp1Q8BJQ2 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usp1Q8BJQ2 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Usp1Q8BJQ2 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usp1Q8BJQ2 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Usp1Q8BJQ2 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Usp1Q8BJQ2 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usp1Q8BJQ2 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Usp1Q8BJQ2 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usp1Q8BJQ2 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.28□□□□□ -0.44
Usp1Q8BJQ2 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Usp1Q8BJQ2 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usp1Q8BJQ2 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.28□□□□□ -0.44
Usp1Q8BJQ2 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usp1Q8BJQ2 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usp1Q8BJQ2 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Usp1Q8BJQ2 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usp1Q8BJQ2 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Usp1Q8BJQ2 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usp1Q8BJQ2 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usp1Q8BJQ2 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usp1Q8BJQ2 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.28□□□□□ -0.44
Usp1Q8BJQ2 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Usp1Q8BJQ2 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Usp1Q8BJQ2 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Usp1Q8BJQ2 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.27□□□□□ -0.44
Usp1Q8BJQ2 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Usp1Q8BJQ2 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Usp1Q8BJQ2 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Usp1Q8BJQ2 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Usp1Q8BJQ2 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Usp1Q8BJQ2 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Usp1Q8BJQ2 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Usp1Q8BJQ2 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Usp1Q8BJQ2 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Usp1Q8BJQ2 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Usp1Q8BJQ2 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC12.27□□□□□ -0.45
Usp1Q8BJQ2 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Usp1Q8BJQ2 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Usp1Q8BJQ2 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Usp1Q8BJQ2 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Usp1Q8BJQ2 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Usp1Q8BJQ2 Gm11340-201ENSMUST00000119226 412 ntBASIC12.27□□□□□ -0.45
Usp1Q8BJQ2 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.27□□□□□ -0.45
Usp1Q8BJQ2 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC12.27□□□□□ -0.45
Usp1Q8BJQ2 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC12.27□□□□□ -0.45
Usp1Q8BJQ2 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC12.27□□□□□ -0.45
Usp1Q8BJQ2 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Usp1Q8BJQ2 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Usp1Q8BJQ2 AC153961.1-201ENSMUST00000217760 385 ntBASIC12.27□□□□□ -0.45
Usp1Q8BJQ2 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC12.27□□□□□ -0.45
Usp1Q8BJQ2 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Usp1Q8BJQ2 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Usp1Q8BJQ2 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Usp1Q8BJQ2 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Usp1Q8BJQ2 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Usp1Q8BJQ2 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Usp1Q8BJQ2 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Usp1Q8BJQ2 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Usp1Q8BJQ2 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Usp1Q8BJQ2 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Usp1Q8BJQ2 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms