Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Rpp38Q80UU2 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC11.49□□□□□ -0.57
Rpp38Q80UU2 AC141438.2-201ENSMUST00000215068 271 ntBASIC11.49□□□□□ -0.57
Rpp38Q80UU2 CT009546.1-201ENSMUST00000222573 1120 ntBASIC11.49□□□□□ -0.57
Rpp38Q80UU2 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rpp38Q80UU2 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Rpp38Q80UU2 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.49□□□□□ -0.57
Rpp38Q80UU2 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Rpp38Q80UU2 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.49□□□□□ -0.57
Rpp38Q80UU2 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rpp38Q80UU2 Gm5171-201ENSMUST00000214944 1415 ntBASIC11.49□□□□□ -0.57
Rpp38Q80UU2 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rpp38Q80UU2 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Rpp38Q80UU2 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rpp38Q80UU2 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC11.49□□□□□ -0.57
Rpp38Q80UU2 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rpp38Q80UU2 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rpp38Q80UU2 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rpp38Q80UU2 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Rpp38Q80UU2 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rpp38Q80UU2 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rpp38Q80UU2 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rpp38Q80UU2 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rpp38Q80UU2 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rpp38Q80UU2 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rpp38Q80UU2 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rpp38Q80UU2 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rpp38Q80UU2 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rpp38Q80UU2 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rpp38Q80UU2 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rpp38Q80UU2 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rpp38Q80UU2 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rpp38Q80UU2 Gm43963-201ENSMUST00000203466 2488 ntBASIC11.48□□□□□ -0.57
Rpp38Q80UU2 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Rpp38Q80UU2 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rpp38Q80UU2 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rpp38Q80UU2 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rpp38Q80UU2 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rpp38Q80UU2 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Rpp38Q80UU2 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rpp38Q80UU2 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rpp38Q80UU2 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
Rpp38Q80UU2 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rpp38Q80UU2 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rpp38Q80UU2 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rpp38Q80UU2 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rpp38Q80UU2 Gm12419-201ENSMUST00000116649 636 ntBASIC11.48□□□□□ -0.57
Rpp38Q80UU2 Gm15617-201ENSMUST00000118973 771 ntBASIC11.48□□□□□ -0.57
Rpp38Q80UU2 Gm11836-201ENSMUST00000121022 441 ntBASIC11.48□□□□□ -0.57
Rpp38Q80UU2 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC11.48□□□□□ -0.57
Rpp38Q80UU2 Gm23699-201ENSMUST00000158835 135 ntBASIC11.48□□□□□ -0.57
Rpp38Q80UU2 Gm37466-201ENSMUST00000195692 652 ntBASIC11.48□□□□□ -0.57
Rpp38Q80UU2 Gm9353-201ENSMUST00000200472 604 ntBASIC11.48□□□□□ -0.57
Rpp38Q80UU2 Gm9555-201ENSMUST00000200908 583 ntBASIC11.48□□□□□ -0.57
Rpp38Q80UU2 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Rpp38Q80UU2 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
Rpp38Q80UU2 AC102569.1-201ENSMUST00000221563 685 ntBASIC11.48□□□□□ -0.57
Rpp38Q80UU2 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rpp38Q80UU2 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Rpp38Q80UU2 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Rpp38Q80UU2 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Rpp38Q80UU2 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Rpp38Q80UU2 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rpp38Q80UU2 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
Rpp38Q80UU2 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Rpp38Q80UU2 Gm19178-201ENSMUST00000217524 1819 ntBASIC11.48□□□□□ -0.57
Rpp38Q80UU2 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rpp38Q80UU2 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.48□□□□□ -0.57
Rpp38Q80UU2 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rpp38Q80UU2 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Rpp38Q80UU2 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rpp38Q80UU2 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Rpp38Q80UU2 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.47□□□□□ -0.57
Rpp38Q80UU2 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rpp38Q80UU2 Gm37969-201ENSMUST00000195777 3409 ntBASIC11.47□□□□□ -0.57
Rpp38Q80UU2 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.47□□□□□ -0.57
Rpp38Q80UU2 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rpp38Q80UU2 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rpp38Q80UU2 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rpp38Q80UU2 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rpp38Q80UU2 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Rpp38Q80UU2 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rpp38Q80UU2 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rpp38Q80UU2 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rpp38Q80UU2 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rpp38Q80UU2 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rpp38Q80UU2 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rpp38Q80UU2 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC11.47□□□□□ -0.57
Rpp38Q80UU2 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rpp38Q80UU2 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rpp38Q80UU2 AC109214.1-201ENSMUST00000219520 1372 ntBASIC11.47□□□□□ -0.57
Rpp38Q80UU2 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rpp38Q80UU2 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Rpp38Q80UU2 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rpp38Q80UU2 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rpp38Q80UU2 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC11.47□□□□□ -0.57
Rpp38Q80UU2 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC11.47□□□□□ -0.57
Rpp38Q80UU2 Gm14740-201ENSMUST00000118538 1150 ntBASIC11.47□□□□□ -0.57
Rpp38Q80UU2 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rpp38Q80UU2 Gm9089-201ENSMUST00000122027 526 ntBASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms