Protein–RNA interactions for Protein: Q80TP3

Ubr5, E3 ubiquitin-protein ligase UBR5, mousemouse

Predictions only

Length 2,792 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr5Q80TP3 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ubr5Q80TP3 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ubr5Q80TP3 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ubr5Q80TP3 Gm6157-201ENSMUST00000199935 1897 ntBASIC9.7□□□□□ -0.86
Ubr5Q80TP3 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ubr5Q80TP3 Gm8876-201ENSMUST00000120768 1122 ntBASIC9.7□□□□□ -0.86
Ubr5Q80TP3 Gm42133-201ENSMUST00000196076 637 ntTSL 3 BASIC9.7□□□□□ -0.86
Ubr5Q80TP3 AC154585.1-201ENSMUST00000218917 997 ntBASIC9.7□□□□□ -0.86
Ubr5Q80TP3 Klk1b22-201ENSMUST00000077528 855 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ubr5Q80TP3 Gm38385-201ENSMUST00000194454 2351 ntBASIC9.7□□□□□ -0.86
Ubr5Q80TP3 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ubr5Q80TP3 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Ubr5Q80TP3 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ubr5Q80TP3 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ubr5Q80TP3 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Ubr5Q80TP3 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ubr5Q80TP3 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ubr5Q80TP3 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ubr5Q80TP3 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ubr5Q80TP3 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ubr5Q80TP3 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ubr5Q80TP3 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Ubr5Q80TP3 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC9.7□□□□□ -0.86
Ubr5Q80TP3 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ubr5Q80TP3 Gm9544-201ENSMUST00000223349 2482 ntBASIC9.7□□□□□ -0.86
Ubr5Q80TP3 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Ubr5Q80TP3 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Ubr5Q80TP3 H2afy3-201ENSMUST00000151919 1112 ntBASIC9.7□□□□□ -0.86
Ubr5Q80TP3 Mir6396-201ENSMUST00000183603 111 ntBASIC9.7□□□□□ -0.86
Ubr5Q80TP3 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Ubr5Q80TP3 Vps25-201ENSMUST00000007533 615 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Ubr5Q80TP3 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ubr5Q80TP3 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Ubr5Q80TP3 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ubr5Q80TP3 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Ubr5Q80TP3 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ubr5Q80TP3 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ubr5Q80TP3 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ubr5Q80TP3 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Ubr5Q80TP3 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ubr5Q80TP3 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ubr5Q80TP3 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Ubr5Q80TP3 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ubr5Q80TP3 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Ubr5Q80TP3 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ubr5Q80TP3 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ubr5Q80TP3 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC9.69□□□□□ -0.86
Ubr5Q80TP3 Hectd2os-203ENSMUST00000142067 2662 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Ubr5Q80TP3 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ubr5Q80TP3 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Ubr5Q80TP3 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Ubr5Q80TP3 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Ubr5Q80TP3 Ighv1-49-201ENSMUST00000103519 294 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Ubr5Q80TP3 Gm16193-201ENSMUST00000125903 778 ntTSL 3 BASIC9.69□□□□□ -0.86
Ubr5Q80TP3 Gm12207-201ENSMUST00000143016 494 ntTSL 2 BASIC9.69□□□□□ -0.86
Ubr5Q80TP3 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC9.69□□□□□ -0.86
Ubr5Q80TP3 Gm20474-201ENSMUST00000180089 596 ntBASIC9.69□□□□□ -0.86
Ubr5Q80TP3 Rwdd2a-203ENSMUST00000185566 1054 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
Ubr5Q80TP3 Gm5845-201ENSMUST00000195812 796 ntBASIC9.69□□□□□ -0.86
Ubr5Q80TP3 Gm10134-201ENSMUST00000074761 381 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Ubr5Q80TP3 Mcu-201ENSMUST00000009791 1079 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Ubr5Q80TP3 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC9.69□□□□□ -0.86
Ubr5Q80TP3 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ubr5Q80TP3 Sdcbp-204ENSMUST00000108374 1803 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Ubr5Q80TP3 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ubr5Q80TP3 Iyd-201ENSMUST00000019896 1579 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ubr5Q80TP3 Smok2b-201ENSMUST00000059824 1584 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Ubr5Q80TP3 Gm19027-201ENSMUST00000187291 1355 ntBASIC9.69□□□□□ -0.86
Ubr5Q80TP3 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ubr5Q80TP3 Faf2-201ENSMUST00000026991 1748 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Ubr5Q80TP3 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ubr5Q80TP3 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ubr5Q80TP3 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ubr5Q80TP3 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ubr5Q80TP3 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ubr5Q80TP3 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Ubr5Q80TP3 Atp5s-201ENSMUST00000021372 1485 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ubr5Q80TP3 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ubr5Q80TP3 Dpm1-202ENSMUST00000109193 1076 ntTSL 5 BASIC9.69□□□□□ -0.86
Ubr5Q80TP3 Gm11919-201ENSMUST00000117609 721 ntBASIC9.69□□□□□ -0.86
Ubr5Q80TP3 Gm11544-201ENSMUST00000120215 382 ntBASIC9.69□□□□□ -0.86
Ubr5Q80TP3 Rpl7a-ps12-201ENSMUST00000120384 794 ntBASIC9.69□□□□□ -0.86
Ubr5Q80TP3 Gm13781-201ENSMUST00000124153 492 ntTSL 2 BASIC9.69□□□□□ -0.86
Ubr5Q80TP3 Stamos-201ENSMUST00000152524 801 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Ubr5Q80TP3 Gm9619-201ENSMUST00000211587 762 ntBASIC9.69□□□□□ -0.86
Ubr5Q80TP3 AC122024.3-201ENSMUST00000217719 294 ntBASIC9.69□□□□□ -0.86
Ubr5Q80TP3 Scgb3a1-201ENSMUST00000043873 493 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ubr5Q80TP3 Scgb3a1-202ENSMUST00000076006 598 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ubr5Q80TP3 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ubr5Q80TP3 Ntrk2-209ENSMUST00000225950 2640 ntBASIC9.69□□□□□ -0.86
Ubr5Q80TP3 AC122335.2-201ENSMUST00000213901 6181 ntBASIC9.69□□□□□ -0.86
Ubr5Q80TP3 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Ubr5Q80TP3 AC116596.1-201ENSMUST00000228112 1762 ntBASIC9.69□□□□□ -0.86
Ubr5Q80TP3 Gm5174-201ENSMUST00000171131 1423 ntBASIC9.69□□□□□ -0.86
Ubr5Q80TP3 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ubr5Q80TP3 Gm9947-201ENSMUST00000067599 2920 ntBASIC9.69□□□□□ -0.86
Ubr5Q80TP3 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Ubr5Q80TP3 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ubr5Q80TP3 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ubr5Q80TP3 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms