Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Slx4Q6P1D7 Snord55-201ENSMUST00000174939 79 ntBASIC17.44■□□□□ 0.38
Slx4Q6P1D7 Gm5254-201ENSMUST00000188353 977 ntBASIC17.44■□□□□ 0.38
Slx4Q6P1D7 Gm38007-201ENSMUST00000192187 313 ntBASIC17.44■□□□□ 0.38
Slx4Q6P1D7 Gm18555-201ENSMUST00000197935 584 ntBASIC17.44■□□□□ 0.38
Slx4Q6P1D7 Gm17936-201ENSMUST00000199413 988 ntBASIC17.44■□□□□ 0.38
Slx4Q6P1D7 Gm9353-201ENSMUST00000200472 604 ntBASIC17.44■□□□□ 0.38
Slx4Q6P1D7 Gm43460-201ENSMUST00000202491 1057 ntBASIC17.44■□□□□ 0.38
Slx4Q6P1D7 Gm43811-201ENSMUST00000202862 695 ntBASIC17.44■□□□□ 0.38
Slx4Q6P1D7 Ghrl-203ENSMUST00000203588 237 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Slx4Q6P1D7 Gm7880-201ENSMUST00000203748 871 ntBASIC17.44■□□□□ 0.38
Slx4Q6P1D7 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Slx4Q6P1D7 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC17.44■□□□□ 0.38
Slx4Q6P1D7 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Slx4Q6P1D7 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Slx4Q6P1D7 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Slx4Q6P1D7 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Slx4Q6P1D7 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Slx4Q6P1D7 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Slx4Q6P1D7 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Slx4Q6P1D7 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Slx4Q6P1D7 Acnat1-201ENSMUST00000095086 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Slx4Q6P1D7 B430203G13Rik-201ENSMUST00000169657 1375 ntBASIC17.43■□□□□ 0.38
Slx4Q6P1D7 5730422E09Rik-201ENSMUST00000180733 1740 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Slx4Q6P1D7 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Slx4Q6P1D7 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC17.43■□□□□ 0.38
Slx4Q6P1D7 Gm25288-201ENSMUST00000122800 265 ntBASIC17.43■□□□□ 0.38
Slx4Q6P1D7 St8sia3os-204ENSMUST00000140903 383 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Slx4Q6P1D7 Gm43726-201ENSMUST00000199110 775 ntBASIC17.43■□□□□ 0.38
Slx4Q6P1D7 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC17.43■□□□□ 0.38
Slx4Q6P1D7 CT030195.2-201ENSMUST00000226074 1286 ntBASIC17.43■□□□□ 0.38
Slx4Q6P1D7 Rps9-201ENSMUST00000006496 751 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Slx4Q6P1D7 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Slx4Q6P1D7 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Slx4Q6P1D7 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Slx4Q6P1D7 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Slx4Q6P1D7 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Slx4Q6P1D7 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Slx4Q6P1D7 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Slx4Q6P1D7 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Slx4Q6P1D7 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Slx4Q6P1D7 Gm13135-201ENSMUST00000117628 3121 ntBASIC17.42■□□□□ 0.38
Slx4Q6P1D7 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Slx4Q6P1D7 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Slx4Q6P1D7 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Slx4Q6P1D7 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Slx4Q6P1D7 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Slx4Q6P1D7 Cd300ld5-201ENSMUST00000100239 852 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Slx4Q6P1D7 Cd300ld4-201ENSMUST00000100240 852 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Slx4Q6P1D7 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Slx4Q6P1D7 Gm12947-201ENSMUST00000116114 420 ntBASIC17.42■□□□□ 0.38
Slx4Q6P1D7 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Slx4Q6P1D7 2410152P15Rik-201ENSMUST00000137405 871 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Slx4Q6P1D7 Gm6216-201ENSMUST00000182390 687 ntBASIC17.42■□□□□ 0.38
Slx4Q6P1D7 Mir8091-201ENSMUST00000183602 139 ntBASIC17.42■□□□□ 0.38
Slx4Q6P1D7 Gm6794-201ENSMUST00000203829 457 ntBASIC17.42■□□□□ 0.38
Slx4Q6P1D7 Map7-203ENSMUST00000213312 795 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Slx4Q6P1D7 AC159196.1-201ENSMUST00000225524 377 ntBASIC17.42■□□□□ 0.38
Slx4Q6P1D7 Cd300ld3-201ENSMUST00000092459 852 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Slx4Q6P1D7 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Slx4Q6P1D7 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Slx4Q6P1D7 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Slx4Q6P1D7 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Slx4Q6P1D7 Kcne3-202ENSMUST00000170954 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Slx4Q6P1D7 Gm6157-201ENSMUST00000199935 1897 ntBASIC17.42■□□□□ 0.38
Slx4Q6P1D7 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Slx4Q6P1D7 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Slx4Q6P1D7 AC154639.1-201ENSMUST00000224393 2849 ntBASIC17.42■□□□□ 0.38
Slx4Q6P1D7 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slx4Q6P1D7 AC124397.2-201ENSMUST00000225575 2215 ntBASIC17.41■□□□□ 0.38
Slx4Q6P1D7 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Slx4Q6P1D7 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slx4Q6P1D7 Gm13192-201ENSMUST00000101199 208 ntBASIC17.41■□□□□ 0.38
Slx4Q6P1D7 Wfdc3-202ENSMUST00000109328 726 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Slx4Q6P1D7 Gm10443-201ENSMUST00000119024 210 ntBASIC17.41■□□□□ 0.38
Slx4Q6P1D7 Gm12009-201ENSMUST00000121361 1100 ntBASIC17.41■□□□□ 0.38
Slx4Q6P1D7 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Slx4Q6P1D7 Gm25394-201ENSMUST00000157338 133 ntBASIC17.41■□□□□ 0.38
Slx4Q6P1D7 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Slx4Q6P1D7 Gm20703-201ENSMUST00000175668 385 ntTSL 2 BASIC17.41■□□□□ 0.38
Slx4Q6P1D7 Gm8643-201ENSMUST00000195228 625 ntBASIC17.41■□□□□ 0.38
Slx4Q6P1D7 Gm20568-201ENSMUST00000197129 208 ntBASIC17.41■□□□□ 0.38
Slx4Q6P1D7 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC17.41■□□□□ 0.38
Slx4Q6P1D7 Gzmk-201ENSMUST00000038212 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slx4Q6P1D7 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
Slx4Q6P1D7 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slx4Q6P1D7 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slx4Q6P1D7 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Slx4Q6P1D7 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slx4Q6P1D7 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slx4Q6P1D7 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slx4Q6P1D7 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Slx4Q6P1D7 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slx4Q6P1D7 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slx4Q6P1D7 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slx4Q6P1D7 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Slx4Q6P1D7 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Slx4Q6P1D7 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
Slx4Q6P1D7 Gm13281-201ENSMUST00000120871 567 ntBASIC17.4■□□□□ 0.38
Slx4Q6P1D7 Gm20694-201ENSMUST00000176943 404 ntBASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms