Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 CU024892.2-201ENSMUST00000224608 832 ntBASIC10.74□□□□□ -0.69
Sox17Q61473 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox17Q61473 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox17Q61473 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox17Q61473 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Sox17Q61473 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC10.74□□□□□ -0.69
Sox17Q61473 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Sox17Q61473 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC10.74□□□□□ -0.69
Sox17Q61473 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox17Q61473 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox17Q61473 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Sox17Q61473 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox17Q61473 Slx1b-203ENSMUST00000144897 3152 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox17Q61473 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Sox17Q61473 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox17Q61473 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox17Q61473 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC10.74□□□□□ -0.69
Sox17Q61473 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox17Q61473 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox17Q61473 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Sox17Q61473 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox17Q61473 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Sox17Q61473 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Sox17Q61473 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox17Q61473 Gm12799-201ENSMUST00000118151 2560 ntBASIC10.73□□□□□ -0.69
Sox17Q61473 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Sox17Q61473 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox17Q61473 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Sox17Q61473 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox17Q61473 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Sox17Q61473 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox17Q61473 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sox17Q61473 Gm18798-201ENSMUST00000187264 1700 ntBASIC10.73□□□□□ -0.69
Sox17Q61473 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC10.73□□□□□ -0.69
Sox17Q61473 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox17Q61473 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Sox17Q61473 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Sox17Q61473 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox17Q61473 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Sox17Q61473 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sox17Q61473 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox17Q61473 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC10.73□□□□□ -0.69
Sox17Q61473 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC10.73□□□□□ -0.69
Sox17Q61473 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sox17Q61473 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC10.73□□□□□ -0.69
Sox17Q61473 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC10.73□□□□□ -0.69
Sox17Q61473 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sox17Q61473 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sox17Q61473 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox17Q61473 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Sox17Q61473 Gm6266-201ENSMUST00000203844 806 ntBASIC10.73□□□□□ -0.69
Sox17Q61473 Gm7183-201ENSMUST00000213870 1005 ntBASIC10.73□□□□□ -0.69
Sox17Q61473 CT571245.2-201ENSMUST00000218421 305 ntBASIC10.73□□□□□ -0.69
Sox17Q61473 Gm8712-201ENSMUST00000221090 701 ntBASIC10.73□□□□□ -0.69
Sox17Q61473 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC10.73□□□□□ -0.69
Sox17Q61473 AC154222.2-201ENSMUST00000225848 607 ntBASIC10.73□□□□□ -0.69
Sox17Q61473 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Sox17Q61473 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sox17Q61473 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox17Q61473 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
Sox17Q61473 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sox17Q61473 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Sox17Q61473 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox17Q61473 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sox17Q61473 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox17Q61473 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC10.73□□□□□ -0.69
Sox17Q61473 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Sox17Q61473 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox17Q61473 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox17Q61473 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox17Q61473 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox17Q61473 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox17Q61473 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Sox17Q61473 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sox17Q61473 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sox17Q61473 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sox17Q61473 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sox17Q61473 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sox17Q61473 Gm6831-202ENSMUST00000213025 1673 ntBASIC10.73□□□□□ -0.69
Sox17Q61473 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox17Q61473 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox17Q61473 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox17Q61473 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox17Q61473 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox17Q61473 March10-201ENSMUST00000049995 3074 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Sox17Q61473 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sox17Q61473 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox17Q61473 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Sox17Q61473 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox17Q61473 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox17Q61473 Gm12329-201ENSMUST00000120829 1007 ntBASIC10.72□□□□□ -0.69
Sox17Q61473 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox17Q61473 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sox17Q61473 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox17Q61473 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox17Q61473 Gm43966-201ENSMUST00000203301 612 ntBASIC10.72□□□□□ -0.69
Sox17Q61473 Gm18065-201ENSMUST00000221395 526 ntBASIC10.72□□□□□ -0.69
Sox17Q61473 CT009713.10-202ENSMUST00000225734 696 ntBASIC10.72□□□□□ -0.69
Sox17Q61473 AC126253.1-201ENSMUST00000227974 824 ntBASIC10.72□□□□□ -0.69
Sox17Q61473 AC121960.1-201ENSMUST00000227982 564 ntBASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms