Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Syne3Q4FZC9 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Syne3Q4FZC9 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Syne3Q4FZC9 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Syne3Q4FZC9 Gm9466-201ENSMUST00000218144 2246 ntBASIC12.22□□□□□ -0.45
Syne3Q4FZC9 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Syne3Q4FZC9 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Syne3Q4FZC9 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Syne3Q4FZC9 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Syne3Q4FZC9 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Syne3Q4FZC9 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Syne3Q4FZC9 Gm11700-201ENSMUST00000119409 403 ntBASIC12.22□□□□□ -0.45
Syne3Q4FZC9 Gm11450-201ENSMUST00000121144 333 ntBASIC12.22□□□□□ -0.45
Syne3Q4FZC9 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Syne3Q4FZC9 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC12.22□□□□□ -0.45
Syne3Q4FZC9 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.22□□□□□ -0.45
Syne3Q4FZC9 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC12.22□□□□□ -0.45
Syne3Q4FZC9 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Syne3Q4FZC9 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Syne3Q4FZC9 Gm38117-201ENSMUST00000194653 939 ntBASIC12.22□□□□□ -0.45
Syne3Q4FZC9 Gm38314-201ENSMUST00000195709 625 ntBASIC12.22□□□□□ -0.45
Syne3Q4FZC9 Gm6450-201ENSMUST00000200896 574 ntBASIC12.22□□□□□ -0.45
Syne3Q4FZC9 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Syne3Q4FZC9 Gm6905-201ENSMUST00000205729 511 ntBASIC12.22□□□□□ -0.45
Syne3Q4FZC9 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC12.22□□□□□ -0.45
Syne3Q4FZC9 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.22□□□□□ -0.45
Syne3Q4FZC9 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Syne3Q4FZC9 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Syne3Q4FZC9 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC12.22□□□□□ -0.45
Syne3Q4FZC9 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Syne3Q4FZC9 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Syne3Q4FZC9 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Syne3Q4FZC9 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Syne3Q4FZC9 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Syne3Q4FZC9 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Syne3Q4FZC9 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Syne3Q4FZC9 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Syne3Q4FZC9 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Syne3Q4FZC9 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Syne3Q4FZC9 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Syne3Q4FZC9 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Syne3Q4FZC9 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Syne3Q4FZC9 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Syne3Q4FZC9 Gm43931-201ENSMUST00000204817 2870 ntBASIC12.21□□□□□ -0.45
Syne3Q4FZC9 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Syne3Q4FZC9 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Syne3Q4FZC9 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Syne3Q4FZC9 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Syne3Q4FZC9 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Syne3Q4FZC9 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Syne3Q4FZC9 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Syne3Q4FZC9 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Syne3Q4FZC9 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Syne3Q4FZC9 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Syne3Q4FZC9 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Syne3Q4FZC9 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Syne3Q4FZC9 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Syne3Q4FZC9 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Syne3Q4FZC9 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Syne3Q4FZC9 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Syne3Q4FZC9 Gm14058-201ENSMUST00000116082 735 ntBASIC12.21□□□□□ -0.45
Syne3Q4FZC9 Gm13035-201ENSMUST00000117496 342 ntBASIC12.21□□□□□ -0.45
Syne3Q4FZC9 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC12.21□□□□□ -0.45
Syne3Q4FZC9 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Syne3Q4FZC9 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Syne3Q4FZC9 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Syne3Q4FZC9 Gm8815-201ENSMUST00000173809 620 ntBASIC12.21□□□□□ -0.45
Syne3Q4FZC9 Gm4310-201ENSMUST00000177847 889 ntBASIC12.21□□□□□ -0.45
Syne3Q4FZC9 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.21□□□□□ -0.45
Syne3Q4FZC9 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.21□□□□□ -0.45
Syne3Q4FZC9 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Syne3Q4FZC9 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Syne3Q4FZC9 AC122811.1-201ENSMUST00000222257 2921 ntBASIC12.21□□□□□ -0.45
Syne3Q4FZC9 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Syne3Q4FZC9 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Syne3Q4FZC9 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.46
Syne3Q4FZC9 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Syne3Q4FZC9 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Syne3Q4FZC9 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC12.21□□□□□ -0.46
Syne3Q4FZC9 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Syne3Q4FZC9 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Syne3Q4FZC9 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Syne3Q4FZC9 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Syne3Q4FZC9 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Syne3Q4FZC9 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Syne3Q4FZC9 Btrc-209ENSMUST00000224478 2194 ntBASIC12.2□□□□□ -0.46
Syne3Q4FZC9 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Syne3Q4FZC9 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Syne3Q4FZC9 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Syne3Q4FZC9 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Syne3Q4FZC9 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC12.2□□□□□ -0.46
Syne3Q4FZC9 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Syne3Q4FZC9 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Syne3Q4FZC9 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Syne3Q4FZC9 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Syne3Q4FZC9 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC12.2□□□□□ -0.46
Syne3Q4FZC9 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Syne3Q4FZC9 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Syne3Q4FZC9 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Syne3Q4FZC9 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms