Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Usp48Q3V0C5 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC14.29□□□□□ -0.12
Usp48Q3V0C5 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC14.29□□□□□ -0.12
Usp48Q3V0C5 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC14.29□□□□□ -0.12
Usp48Q3V0C5 Gm25116-201ENSMUST00000157191 122 ntBASIC14.29□□□□□ -0.12
Usp48Q3V0C5 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Usp48Q3V0C5 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Usp48Q3V0C5 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Usp48Q3V0C5 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp48Q3V0C5 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Usp48Q3V0C5 Gm8342-201ENSMUST00000209839 757 ntBASIC14.29□□□□□ -0.12
Usp48Q3V0C5 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp48Q3V0C5 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC14.29□□□□□ -0.12
Usp48Q3V0C5 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC14.29□□□□□ -0.12
Usp48Q3V0C5 AC154572.1-201ENSMUST00000226098 1204 ntBASIC14.29□□□□□ -0.12
Usp48Q3V0C5 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp48Q3V0C5 n-R5s185-201ENSMUST00000083953 119 ntBASIC14.29□□□□□ -0.12
Usp48Q3V0C5 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Usp48Q3V0C5 AC122860.2-201ENSMUST00000217967 2671 ntBASIC14.29□□□□□ -0.12
Usp48Q3V0C5 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp48Q3V0C5 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Usp48Q3V0C5 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp48Q3V0C5 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Usp48Q3V0C5 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Usp48Q3V0C5 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp48Q3V0C5 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp48Q3V0C5 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp48Q3V0C5 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp48Q3V0C5 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Usp48Q3V0C5 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Usp48Q3V0C5 Gm37513-201ENSMUST00000194830 2268 ntBASIC14.29□□□□□ -0.12
Usp48Q3V0C5 Gm38378-201ENSMUST00000195153 2268 ntBASIC14.29□□□□□ -0.12
Usp48Q3V0C5 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp48Q3V0C5 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp48Q3V0C5 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp48Q3V0C5 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp48Q3V0C5 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Usp48Q3V0C5 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp48Q3V0C5 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp48Q3V0C5 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp48Q3V0C5 Gm12419-201ENSMUST00000116649 636 ntBASIC14.28□□□□□ -0.12
Usp48Q3V0C5 Gm13117-201ENSMUST00000120894 691 ntBASIC14.28□□□□□ -0.12
Usp48Q3V0C5 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp48Q3V0C5 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Usp48Q3V0C5 Gm3150-201ENSMUST00000166418 204 ntBASIC14.28□□□□□ -0.12
Usp48Q3V0C5 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC14.28□□□□□ -0.12
Usp48Q3V0C5 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Usp48Q3V0C5 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC14.28□□□□□ -0.12
Usp48Q3V0C5 Gm43334-201ENSMUST00000197740 1318 ntBASIC14.28□□□□□ -0.12
Usp48Q3V0C5 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp48Q3V0C5 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp48Q3V0C5 Gm3726-201ENSMUST00000203110 785 ntBASIC14.28□□□□□ -0.12
Usp48Q3V0C5 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC14.28□□□□□ -0.12
Usp48Q3V0C5 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp48Q3V0C5 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp48Q3V0C5 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Usp48Q3V0C5 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp48Q3V0C5 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp48Q3V0C5 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp48Q3V0C5 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Usp48Q3V0C5 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Usp48Q3V0C5 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC14.28□□□□□ -0.12
Usp48Q3V0C5 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Usp48Q3V0C5 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp48Q3V0C5 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Usp48Q3V0C5 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp48Q3V0C5 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp48Q3V0C5 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC14.27□□□□□ -0.12
Usp48Q3V0C5 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Usp48Q3V0C5 Gm6655-201ENSMUST00000201932 1309 ntBASIC14.27□□□□□ -0.12
Usp48Q3V0C5 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp48Q3V0C5 Gm13351-201ENSMUST00000118087 414 ntBASIC14.27□□□□□ -0.13
Usp48Q3V0C5 Gm15003-201ENSMUST00000118884 446 ntBASIC14.27□□□□□ -0.13
Usp48Q3V0C5 Gm5419-201ENSMUST00000119301 527 ntBASIC14.27□□□□□ -0.13
Usp48Q3V0C5 Gm10169-201ENSMUST00000121822 348 ntBASIC14.27□□□□□ -0.13
Usp48Q3V0C5 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Usp48Q3V0C5 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Usp48Q3V0C5 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Usp48Q3V0C5 Ighv1-2-201ENSMUST00000195325 378 ntBASIC14.27□□□□□ -0.13
Usp48Q3V0C5 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC14.27□□□□□ -0.13
Usp48Q3V0C5 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp48Q3V0C5 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp48Q3V0C5 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp48Q3V0C5 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp48Q3V0C5 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Usp48Q3V0C5 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Usp48Q3V0C5 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Usp48Q3V0C5 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp48Q3V0C5 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp48Q3V0C5 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp48Q3V0C5 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp48Q3V0C5 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp48Q3V0C5 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp48Q3V0C5 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC14.27□□□□□ -0.13
Usp48Q3V0C5 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp48Q3V0C5 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp48Q3V0C5 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC14.27□□□□□ -0.13
Usp48Q3V0C5 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp48Q3V0C5 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp48Q3V0C5 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms