Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Znf48Q3US17 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Znf48Q3US17 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Znf48Q3US17 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Znf48Q3US17 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC9.83□□□□□ -0.84
Znf48Q3US17 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Znf48Q3US17 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Znf48Q3US17 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC9.83□□□□□ -0.84
Znf48Q3US17 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Znf48Q3US17 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Znf48Q3US17 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Znf48Q3US17 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Znf48Q3US17 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Znf48Q3US17 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Znf48Q3US17 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Znf48Q3US17 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Znf48Q3US17 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC9.82□□□□□ -0.84
Znf48Q3US17 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Znf48Q3US17 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Znf48Q3US17 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Znf48Q3US17 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Znf48Q3US17 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Znf48Q3US17 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Znf48Q3US17 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Znf48Q3US17 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Znf48Q3US17 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Znf48Q3US17 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC9.82□□□□□ -0.84
Znf48Q3US17 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC9.82□□□□□ -0.84
Znf48Q3US17 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC9.82□□□□□ -0.84
Znf48Q3US17 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC9.82□□□□□ -0.84
Znf48Q3US17 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC9.82□□□□□ -0.84
Znf48Q3US17 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Znf48Q3US17 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Znf48Q3US17 Gm15595-201ENSMUST00000120840 961 ntBASIC9.82□□□□□ -0.84
Znf48Q3US17 Gm12978-201ENSMUST00000121250 522 ntBASIC9.82□□□□□ -0.84
Znf48Q3US17 Gm12811-201ENSMUST00000125237 667 ntTSL 3 BASIC9.82□□□□□ -0.84
Znf48Q3US17 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Znf48Q3US17 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC9.82□□□□□ -0.84
Znf48Q3US17 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Znf48Q3US17 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC9.82□□□□□ -0.84
Znf48Q3US17 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Znf48Q3US17 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Znf48Q3US17 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Znf48Q3US17 Esd-ps-201ENSMUST00000170684 847 ntBASIC9.82□□□□□ -0.84
Znf48Q3US17 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Znf48Q3US17 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC9.82□□□□□ -0.84
Znf48Q3US17 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC9.82□□□□□ -0.84
Znf48Q3US17 Gm29436-202ENSMUST00000189054 1172 ntTSL 5 BASIC9.82□□□□□ -0.84
Znf48Q3US17 Gm28174-201ENSMUST00000191003 370 ntTSL 5 BASIC9.82□□□□□ -0.84
Znf48Q3US17 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC9.82□□□□□ -0.84
Znf48Q3US17 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Znf48Q3US17 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Znf48Q3US17 Ighv8-10-201ENSMUST00000199579 358 ntBASIC9.82□□□□□ -0.84
Znf48Q3US17 Gm44332-201ENSMUST00000203712 433 ntBASIC9.82□□□□□ -0.84
Znf48Q3US17 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC9.82□□□□□ -0.84
Znf48Q3US17 AC107638.1-201ENSMUST00000213690 1061 ntBASIC9.82□□□□□ -0.84
Znf48Q3US17 AC166051.1-201ENSMUST00000214313 210 ntBASIC9.82□□□□□ -0.84
Znf48Q3US17 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC9.82□□□□□ -0.84
Znf48Q3US17 Gm35135-201ENSMUST00000219885 990 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Znf48Q3US17 AC160962.2-201ENSMUST00000224761 632 ntBASIC9.82□□□□□ -0.84
Znf48Q3US17 AC167013.1-201ENSMUST00000228592 202 ntBASIC9.82□□□□□ -0.84
Znf48Q3US17 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Znf48Q3US17 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC9.82□□□□□ -0.84
Znf48Q3US17 Rnase2a-201ENSMUST00000061936 690 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Znf48Q3US17 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Znf48Q3US17 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Znf48Q3US17 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Znf48Q3US17 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Znf48Q3US17 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC9.82□□□□□ -0.84
Znf48Q3US17 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Znf48Q3US17 AC159195.1-201ENSMUST00000225867 2086 ntBASIC9.82□□□□□ -0.84
Znf48Q3US17 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Znf48Q3US17 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Znf48Q3US17 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Znf48Q3US17 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Znf48Q3US17 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC9.82□□□□□ -0.84
Znf48Q3US17 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Znf48Q3US17 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Znf48Q3US17 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Znf48Q3US17 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Znf48Q3US17 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Znf48Q3US17 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Znf48Q3US17 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC9.82□□□□□ -0.84
Znf48Q3US17 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Znf48Q3US17 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC9.82□□□□□ -0.84
Znf48Q3US17 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Znf48Q3US17 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Znf48Q3US17 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Znf48Q3US17 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Znf48Q3US17 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Znf48Q3US17 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Znf48Q3US17 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Znf48Q3US17 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Znf48Q3US17 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Znf48Q3US17 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Znf48Q3US17 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Znf48Q3US17 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Znf48Q3US17 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Znf48Q3US17 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Znf48Q3US17 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC9.81□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms