Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Limch1Q3UH68 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Limch1Q3UH68 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Limch1Q3UH68 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Limch1Q3UH68 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Limch1Q3UH68 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Limch1Q3UH68 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Limch1Q3UH68 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Limch1Q3UH68 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Limch1Q3UH68 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC13.55□□□□□ -0.24
Limch1Q3UH68 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Limch1Q3UH68 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Limch1Q3UH68 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Limch1Q3UH68 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Limch1Q3UH68 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Limch1Q3UH68 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Limch1Q3UH68 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Limch1Q3UH68 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Limch1Q3UH68 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Limch1Q3UH68 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Limch1Q3UH68 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC13.55□□□□□ -0.24
Limch1Q3UH68 Gm13809-201ENSMUST00000117921 597 ntBASIC13.55□□□□□ -0.24
Limch1Q3UH68 Gm8199-201ENSMUST00000121323 823 ntBASIC13.55□□□□□ -0.24
Limch1Q3UH68 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC13.55□□□□□ -0.24
Limch1Q3UH68 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC13.55□□□□□ -0.24
Limch1Q3UH68 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Limch1Q3UH68 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC13.55□□□□□ -0.24
Limch1Q3UH68 Gm28686-201ENSMUST00000187404 609 ntBASIC13.55□□□□□ -0.24
Limch1Q3UH68 Gm8365-201ENSMUST00000197334 648 ntBASIC13.55□□□□□ -0.24
Limch1Q3UH68 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Limch1Q3UH68 Gm7940-201ENSMUST00000218195 769 ntBASIC13.55□□□□□ -0.24
Limch1Q3UH68 Gm4797-201ENSMUST00000219075 1283 ntBASIC13.55□□□□□ -0.24
Limch1Q3UH68 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Limch1Q3UH68 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Limch1Q3UH68 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Limch1Q3UH68 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC13.55□□□□□ -0.24
Limch1Q3UH68 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Limch1Q3UH68 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Limch1Q3UH68 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Limch1Q3UH68 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Limch1Q3UH68 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Limch1Q3UH68 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Limch1Q3UH68 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Limch1Q3UH68 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
Limch1Q3UH68 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Limch1Q3UH68 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Limch1Q3UH68 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC13.54□□□□□ -0.24
Limch1Q3UH68 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Limch1Q3UH68 Erich3-203ENSMUST00000189969 3460 ntBASIC13.54□□□□□ -0.24
Limch1Q3UH68 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Limch1Q3UH68 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Limch1Q3UH68 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Limch1Q3UH68 Gm18806-201ENSMUST00000207607 1775 ntBASIC13.54□□□□□ -0.24
Limch1Q3UH68 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Limch1Q3UH68 Gm11500-201ENSMUST00000118237 601 ntBASIC13.54□□□□□ -0.24
Limch1Q3UH68 Gm15207-201ENSMUST00000119259 442 ntBASIC13.54□□□□□ -0.24
Limch1Q3UH68 Gm6548-201ENSMUST00000167498 1165 ntBASIC13.54□□□□□ -0.24
Limch1Q3UH68 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Limch1Q3UH68 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Limch1Q3UH68 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC13.54□□□□□ -0.24
Limch1Q3UH68 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC13.54□□□□□ -0.24
Limch1Q3UH68 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC13.54□□□□□ -0.24
Limch1Q3UH68 Gm9540-201ENSMUST00000188230 478 ntBASIC13.54□□□□□ -0.24
Limch1Q3UH68 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Limch1Q3UH68 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Limch1Q3UH68 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Limch1Q3UH68 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Limch1Q3UH68 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC13.54□□□□□ -0.24
Limch1Q3UH68 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Limch1Q3UH68 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Limch1Q3UH68 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Limch1Q3UH68 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Limch1Q3UH68 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Limch1Q3UH68 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
Limch1Q3UH68 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Limch1Q3UH68 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Limch1Q3UH68 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Limch1Q3UH68 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Limch1Q3UH68 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Limch1Q3UH68 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Limch1Q3UH68 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Limch1Q3UH68 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Limch1Q3UH68 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Limch1Q3UH68 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Limch1Q3UH68 Gm43931-201ENSMUST00000204817 2870 ntBASIC13.53□□□□□ -0.24
Limch1Q3UH68 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Limch1Q3UH68 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Limch1Q3UH68 Mup-ps26-201ENSMUST00000121751 202 ntBASIC13.53□□□□□ -0.24
Limch1Q3UH68 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Limch1Q3UH68 Gm8194-201ENSMUST00000159783 859 ntBASIC13.53□□□□□ -0.24
Limch1Q3UH68 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC13.53□□□□□ -0.24
Limch1Q3UH68 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Limch1Q3UH68 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC13.53□□□□□ -0.24
Limch1Q3UH68 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Limch1Q3UH68 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC13.53□□□□□ -0.24
Limch1Q3UH68 Gm43058-201ENSMUST00000197645 625 ntBASIC13.53□□□□□ -0.24
Limch1Q3UH68 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Limch1Q3UH68 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Limch1Q3UH68 Gm45909-201ENSMUST00000212413 1031 ntBASIC13.53□□□□□ -0.24
Limch1Q3UH68 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms