Protein–RNA interactions for Protein: Q07409

Cntn3, Contactin-3, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn3Q07409 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cntn3Q07409 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cntn3Q07409 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cntn3Q07409 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cntn3Q07409 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12.1□□□□□ -0.47
Cntn3Q07409 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Cntn3Q07409 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cntn3Q07409 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cntn3Q07409 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cntn3Q07409 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cntn3Q07409 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Cntn3Q07409 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.1□□□□□ -0.47
Cntn3Q07409 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cntn3Q07409 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cntn3Q07409 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cntn3Q07409 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Cntn3Q07409 2810006K23Rik-201ENSMUST00000077376 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cntn3Q07409 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cntn3Q07409 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cntn3Q07409 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Cntn3Q07409 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cntn3Q07409 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cntn3Q07409 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cntn3Q07409 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cntn3Q07409 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cntn3Q07409 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC12.09□□□□□ -0.47
Cntn3Q07409 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cntn3Q07409 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cntn3Q07409 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Cntn3Q07409 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC12.09□□□□□ -0.47
Cntn3Q07409 Gm16071-201ENSMUST00000119589 793 ntBASIC12.09□□□□□ -0.47
Cntn3Q07409 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC12.09□□□□□ -0.47
Cntn3Q07409 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC12.09□□□□□ -0.47
Cntn3Q07409 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cntn3Q07409 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Cntn3Q07409 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.09□□□□□ -0.47
Cntn3Q07409 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cntn3Q07409 Gm10731-201ENSMUST00000181171 448 ntBASIC12.09□□□□□ -0.47
Cntn3Q07409 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC12.09□□□□□ -0.47
Cntn3Q07409 Gm17826-201ENSMUST00000189720 798 ntBASIC12.09□□□□□ -0.47
Cntn3Q07409 Gm5542-201ENSMUST00000195485 1089 ntBASIC12.09□□□□□ -0.47
Cntn3Q07409 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cntn3Q07409 Gm44421-201ENSMUST00000205064 1221 ntBASIC12.09□□□□□ -0.47
Cntn3Q07409 CT485606.1-201ENSMUST00000213187 878 ntBASIC12.09□□□□□ -0.47
Cntn3Q07409 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cntn3Q07409 Gm6430-201ENSMUST00000054664 1248 ntBASIC12.09□□□□□ -0.47
Cntn3Q07409 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Cntn3Q07409 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cntn3Q07409 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.09□□□□□ -0.47
Cntn3Q07409 AC211878.3-201ENSMUST00000222629 2018 ntBASIC12.09□□□□□ -0.47
Cntn3Q07409 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cntn3Q07409 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cntn3Q07409 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Cntn3Q07409 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cntn3Q07409 Msantd2-204ENSMUST00000211060 2165 ntTSL 3 BASIC12.09□□□□□ -0.47
Cntn3Q07409 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cntn3Q07409 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cntn3Q07409 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Cntn3Q07409 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Cntn3Q07409 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cntn3Q07409 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cntn3Q07409 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cntn3Q07409 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cntn3Q07409 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cntn3Q07409 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.08□□□□□ -0.48
Cntn3Q07409 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cntn3Q07409 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cntn3Q07409 Gm13347-201ENSMUST00000120298 1353 ntBASIC12.08□□□□□ -0.48
Cntn3Q07409 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cntn3Q07409 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cntn3Q07409 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cntn3Q07409 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Cntn3Q07409 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cntn3Q07409 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cntn3Q07409 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC12.08□□□□□ -0.48
Cntn3Q07409 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Cntn3Q07409 Gm11960-201ENSMUST00000122068 925 ntBASIC12.08□□□□□ -0.48
Cntn3Q07409 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cntn3Q07409 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC12.08□□□□□ -0.48
Cntn3Q07409 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC12.08□□□□□ -0.48
Cntn3Q07409 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cntn3Q07409 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC12.08□□□□□ -0.48
Cntn3Q07409 Gm6548-201ENSMUST00000167498 1165 ntBASIC12.08□□□□□ -0.48
Cntn3Q07409 Mir7076-201ENSMUST00000183519 74 ntBASIC12.08□□□□□ -0.48
Cntn3Q07409 Gm3551-201ENSMUST00000190750 664 ntBASIC12.08□□□□□ -0.48
Cntn3Q07409 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC12.08□□□□□ -0.48
Cntn3Q07409 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC12.08□□□□□ -0.48
Cntn3Q07409 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC12.08□□□□□ -0.48
Cntn3Q07409 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cntn3Q07409 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Cntn3Q07409 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cntn3Q07409 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cntn3Q07409 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cntn3Q07409 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cntn3Q07409 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cntn3Q07409 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Cntn3Q07409 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cntn3Q07409 Rad51c-202ENSMUST00000067692 3944 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cntn3Q07409 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cntn3Q07409 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms