Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Lig3P97386 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lig3P97386 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.65□□□□□ -0.38
Lig3P97386 Gm13384-201ENSMUST00000117166 1344 ntBASIC12.65□□□□□ -0.38
Lig3P97386 Gm38140-201ENSMUST00000193617 2755 ntBASIC12.65□□□□□ -0.38
Lig3P97386 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lig3P97386 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lig3P97386 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lig3P97386 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Lig3P97386 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lig3P97386 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC12.65□□□□□ -0.38
Lig3P97386 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Lig3P97386 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lig3P97386 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lig3P97386 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
Lig3P97386 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lig3P97386 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Lig3P97386 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC12.65□□□□□ -0.38
Lig3P97386 Gm11801-201ENSMUST00000117807 746 ntBASIC12.65□□□□□ -0.38
Lig3P97386 Gm15703-201ENSMUST00000120250 880 ntBASIC12.65□□□□□ -0.38
Lig3P97386 Gm4879-201ENSMUST00000122190 1272 ntBASIC12.65□□□□□ -0.38
Lig3P97386 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC12.65□□□□□ -0.38
Lig3P97386 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC12.65□□□□□ -0.38
Lig3P97386 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC12.65□□□□□ -0.38
Lig3P97386 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC12.65□□□□□ -0.38
Lig3P97386 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC12.65□□□□□ -0.38
Lig3P97386 Gm20392-201ENSMUST00000173047 701 ntBASIC12.65□□□□□ -0.38
Lig3P97386 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.65□□□□□ -0.38
Lig3P97386 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Lig3P97386 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lig3P97386 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC12.65□□□□□ -0.38
Lig3P97386 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC12.65□□□□□ -0.38
Lig3P97386 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Lig3P97386 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.65□□□□□ -0.38
Lig3P97386 AC129219.2-201ENSMUST00000224324 701 ntBASIC12.65□□□□□ -0.38
Lig3P97386 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lig3P97386 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Lig3P97386 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lig3P97386 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Lig3P97386 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Lig3P97386 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lig3P97386 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Lig3P97386 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lig3P97386 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lig3P97386 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Lig3P97386 Gm26660-202ENSMUST00000223620 4112 ntBASIC12.65□□□□□ -0.38
Lig3P97386 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lig3P97386 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lig3P97386 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lig3P97386 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lig3P97386 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Lig3P97386 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lig3P97386 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Lig3P97386 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lig3P97386 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Lig3P97386 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
Lig3P97386 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Lig3P97386 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.65□□□□□ -0.39
Lig3P97386 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lig3P97386 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lig3P97386 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lig3P97386 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lig3P97386 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.64□□□□□ -0.39
Lig3P97386 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lig3P97386 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Lig3P97386 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Lig3P97386 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lig3P97386 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lig3P97386 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Lig3P97386 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lig3P97386 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lig3P97386 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lig3P97386 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lig3P97386 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Lig3P97386 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC12.64□□□□□ -0.39
Lig3P97386 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lig3P97386 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC12.64□□□□□ -0.39
Lig3P97386 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Lig3P97386 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.64□□□□□ -0.39
Lig3P97386 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lig3P97386 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Lig3P97386 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lig3P97386 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Lig3P97386 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lig3P97386 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.64□□□□□ -0.39
Lig3P97386 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Lig3P97386 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lig3P97386 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Lig3P97386 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lig3P97386 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lig3P97386 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lig3P97386 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Lig3P97386 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Lig3P97386 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lig3P97386 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Lig3P97386 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.63□□□□□ -0.39
Lig3P97386 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Lig3P97386 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lig3P97386 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lig3P97386 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 111.5 ms