Protein–RNA interactions for Protein: P49698

Hnf4a, Hepatocyte nuclear factor 4-alpha, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hnf4aP49698 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.14□□□□□ -0.63
Hnf4aP49698 Gstp-ps-201ENSMUST00000195526 631 ntBASIC11.14□□□□□ -0.63
Hnf4aP49698 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Hnf4aP49698 Gm45113-201ENSMUST00000207518 165 ntBASIC11.14□□□□□ -0.63
Hnf4aP49698 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.14□□□□□ -0.63
Hnf4aP49698 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.14□□□□□ -0.63
Hnf4aP49698 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hnf4aP49698 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Hnf4aP49698 Gm10288-201ENSMUST00000084614 537 ntBASIC11.14□□□□□ -0.63
Hnf4aP49698 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Hnf4aP49698 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Hnf4aP49698 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Hnf4aP49698 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hnf4aP49698 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hnf4aP49698 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC11.14□□□□□ -0.63
Hnf4aP49698 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hnf4aP49698 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hnf4aP49698 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.14□□□□□ -0.63
Hnf4aP49698 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.14□□□□□ -0.63
Hnf4aP49698 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Hnf4aP49698 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hnf4aP49698 Gm37931-201ENSMUST00000194686 2866 ntBASIC11.14□□□□□ -0.63
Hnf4aP49698 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hnf4aP49698 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hnf4aP49698 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hnf4aP49698 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC11.13□□□□□ -0.63
Hnf4aP49698 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hnf4aP49698 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Hnf4aP49698 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC11.13□□□□□ -0.63
Hnf4aP49698 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hnf4aP49698 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hnf4aP49698 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hnf4aP49698 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.13□□□□□ -0.63
Hnf4aP49698 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Hnf4aP49698 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hnf4aP49698 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hnf4aP49698 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hnf4aP49698 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hnf4aP49698 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Hnf4aP49698 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hnf4aP49698 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hnf4aP49698 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC11.13□□□□□ -0.63
Hnf4aP49698 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.13□□□□□ -0.63
Hnf4aP49698 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Hnf4aP49698 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hnf4aP49698 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hnf4aP49698 AC129336.1-201ENSMUST00000220224 2277 ntBASIC11.13□□□□□ -0.63
Hnf4aP49698 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hnf4aP49698 Gm14071-201ENSMUST00000117817 509 ntBASIC11.13□□□□□ -0.63
Hnf4aP49698 Gm12501-201ENSMUST00000119163 529 ntBASIC11.13□□□□□ -0.63
Hnf4aP49698 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC11.13□□□□□ -0.63
Hnf4aP49698 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC11.13□□□□□ -0.63
Hnf4aP49698 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Hnf4aP49698 Gm3329-201ENSMUST00000159873 556 ntBASIC11.13□□□□□ -0.63
Hnf4aP49698 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.13□□□□□ -0.63
Hnf4aP49698 Gm17040-202ENSMUST00000170597 889 ntBASIC11.13□□□□□ -0.63
Hnf4aP49698 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hnf4aP49698 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Hnf4aP49698 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hnf4aP49698 Gm38151-201ENSMUST00000195085 289 ntBASIC11.13□□□□□ -0.63
Hnf4aP49698 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC11.13□□□□□ -0.63
Hnf4aP49698 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC11.13□□□□□ -0.63
Hnf4aP49698 Gm6108-201ENSMUST00000208365 367 ntBASIC11.13□□□□□ -0.63
Hnf4aP49698 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC11.13□□□□□ -0.63
Hnf4aP49698 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC11.13□□□□□ -0.63
Hnf4aP49698 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC11.13□□□□□ -0.63
Hnf4aP49698 Gm6867-201ENSMUST00000219165 425 ntBASIC11.13□□□□□ -0.63
Hnf4aP49698 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hnf4aP49698 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hnf4aP49698 Mir433-201ENSMUST00000093564 124 ntBASIC11.13□□□□□ -0.63
Hnf4aP49698 Gm21811-201ENSMUST00000096485 930 ntBASIC11.13□□□□□ -0.63
Hnf4aP49698 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Hnf4aP49698 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Hnf4aP49698 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hnf4aP49698 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.13□□□□□ -0.63
Hnf4aP49698 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hnf4aP49698 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hnf4aP49698 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Hnf4aP49698 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hnf4aP49698 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Hnf4aP49698 Gm18806-201ENSMUST00000207607 1775 ntBASIC11.13□□□□□ -0.63
Hnf4aP49698 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hnf4aP49698 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Hnf4aP49698 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hnf4aP49698 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC11.13□□□□□ -0.63
Hnf4aP49698 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Hnf4aP49698 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Hnf4aP49698 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Hnf4aP49698 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Hnf4aP49698 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hnf4aP49698 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hnf4aP49698 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Hnf4aP49698 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Hnf4aP49698 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
Hnf4aP49698 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hnf4aP49698 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hnf4aP49698 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Hnf4aP49698 AC154404.1-201ENSMUST00000223601 2077 ntBASIC11.12□□□□□ -0.63
Hnf4aP49698 Gm13910-201ENSMUST00000121752 1428 ntBASIC11.12□□□□□ -0.63
Hnf4aP49698 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms