Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Gm12783-201ENSMUST00000121425 397 ntBASIC13.18□□□□□ -0.3
Vcam1P29533 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vcam1P29533 Gm24809-201ENSMUST00000175318 271 ntBASIC13.18□□□□□ -0.3
Vcam1P29533 Mrip-ps-201ENSMUST00000184613 940 ntBASIC13.18□□□□□ -0.3
Vcam1P29533 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Vcam1P29533 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vcam1P29533 Gm25580-201ENSMUST00000083409 327 ntBASIC13.18□□□□□ -0.3
Vcam1P29533 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vcam1P29533 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vcam1P29533 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Vcam1P29533 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vcam1P29533 Gm6157-201ENSMUST00000199935 1897 ntBASIC13.18□□□□□ -0.3
Vcam1P29533 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vcam1P29533 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vcam1P29533 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Vcam1P29533 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vcam1P29533 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Vcam1P29533 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Vcam1P29533 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vcam1P29533 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC13.17□□□□□ -0.3
Vcam1P29533 Gm43152-201ENSMUST00000202495 1638 ntBASIC13.17□□□□□ -0.3
Vcam1P29533 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC13.17□□□□□ -0.3
Vcam1P29533 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vcam1P29533 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vcam1P29533 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vcam1P29533 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vcam1P29533 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vcam1P29533 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vcam1P29533 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vcam1P29533 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vcam1P29533 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vcam1P29533 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vcam1P29533 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Vcam1P29533 Gm3828-201ENSMUST00000121817 257 ntBASIC13.17□□□□□ -0.3
Vcam1P29533 Mir1905-201ENSMUST00000122779 82 ntBASIC13.17□□□□□ -0.3
Vcam1P29533 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC13.17□□□□□ -0.3
Vcam1P29533 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC13.17□□□□□ -0.3
Vcam1P29533 Gm44755-201ENSMUST00000207830 2102 ntBASIC13.17□□□□□ -0.3
Vcam1P29533 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vcam1P29533 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vcam1P29533 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vcam1P29533 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vcam1P29533 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Vcam1P29533 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vcam1P29533 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vcam1P29533 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vcam1P29533 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Vcam1P29533 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC13.17□□□□□ -0.3
Vcam1P29533 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vcam1P29533 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vcam1P29533 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vcam1P29533 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vcam1P29533 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vcam1P29533 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vcam1P29533 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vcam1P29533 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vcam1P29533 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vcam1P29533 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vcam1P29533 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vcam1P29533 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vcam1P29533 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vcam1P29533 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vcam1P29533 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC13.16□□□□□ -0.3
Vcam1P29533 AC124397.2-201ENSMUST00000225575 2215 ntBASIC13.16□□□□□ -0.3
Vcam1P29533 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vcam1P29533 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Vcam1P29533 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vcam1P29533 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vcam1P29533 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vcam1P29533 Btrc-209ENSMUST00000224478 2194 ntBASIC13.16□□□□□ -0.3
Vcam1P29533 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vcam1P29533 Gm25562-201ENSMUST00000104608 133 ntBASIC13.16□□□□□ -0.3
Vcam1P29533 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC13.16□□□□□ -0.3
Vcam1P29533 Gm12389-201ENSMUST00000117696 418 ntBASIC13.16□□□□□ -0.3
Vcam1P29533 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC13.16□□□□□ -0.3
Vcam1P29533 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vcam1P29533 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC13.16□□□□□ -0.3
Vcam1P29533 Gm42867-201ENSMUST00000202995 469 ntBASIC13.16□□□□□ -0.3
Vcam1P29533 Gm18706-201ENSMUST00000210053 1066 ntBASIC13.16□□□□□ -0.3
Vcam1P29533 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Vcam1P29533 Gm9102-201ENSMUST00000219250 465 ntBASIC13.16□□□□□ -0.3
Vcam1P29533 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC13.16□□□□□ -0.3
Vcam1P29533 AC154176.1-201ENSMUST00000225897 220 ntBASIC13.16□□□□□ -0.3
Vcam1P29533 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vcam1P29533 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vcam1P29533 Gm8181-201ENSMUST00000062242 669 ntBASIC13.16□□□□□ -0.3
Vcam1P29533 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
Vcam1P29533 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vcam1P29533 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Vcam1P29533 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Vcam1P29533 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vcam1P29533 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vcam1P29533 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vcam1P29533 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vcam1P29533 Gm37651-201ENSMUST00000194679 1494 ntBASIC13.16□□□□□ -0.3
Vcam1P29533 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vcam1P29533 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vcam1P29533 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vcam1P29533 Gm44806-201ENSMUST00000205574 2303 ntBASIC13.16□□□□□ -0.3
Vcam1P29533 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms