Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC12.64□□□□□ -0.39
Pde6bP23440 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC12.64□□□□□ -0.39
Pde6bP23440 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pde6bP23440 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pde6bP23440 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Pde6bP23440 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Pde6bP23440 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pde6bP23440 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pde6bP23440 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Pde6bP23440 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Pde6bP23440 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Pde6bP23440 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pde6bP23440 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pde6bP23440 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.64□□□□□ -0.39
Pde6bP23440 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Pde6bP23440 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pde6bP23440 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pde6bP23440 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pde6bP23440 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Pde6bP23440 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Pde6bP23440 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pde6bP23440 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pde6bP23440 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.63□□□□□ -0.39
Pde6bP23440 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pde6bP23440 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pde6bP23440 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.63□□□□□ -0.39
Pde6bP23440 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pde6bP23440 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pde6bP23440 Selenot-ps-201ENSMUST00000119098 593 ntBASIC12.63□□□□□ -0.39
Pde6bP23440 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.63□□□□□ -0.39
Pde6bP23440 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC12.63□□□□□ -0.39
Pde6bP23440 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC12.63□□□□□ -0.39
Pde6bP23440 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pde6bP23440 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pde6bP23440 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC12.63□□□□□ -0.39
Pde6bP23440 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pde6bP23440 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC12.63□□□□□ -0.39
Pde6bP23440 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Pde6bP23440 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pde6bP23440 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pde6bP23440 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pde6bP23440 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pde6bP23440 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pde6bP23440 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.63□□□□□ -0.39
Pde6bP23440 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.63□□□□□ -0.39
Pde6bP23440 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pde6bP23440 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pde6bP23440 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pde6bP23440 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.63□□□□□ -0.39
Pde6bP23440 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pde6bP23440 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pde6bP23440 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pde6bP23440 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Pde6bP23440 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6bP23440 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC12.62□□□□□ -0.39
Pde6bP23440 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6bP23440 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Pde6bP23440 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6bP23440 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6bP23440 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6bP23440 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6bP23440 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC12.62□□□□□ -0.39
Pde6bP23440 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Pde6bP23440 Gm16166-201ENSMUST00000118291 787 ntBASIC12.62□□□□□ -0.39
Pde6bP23440 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.62□□□□□ -0.39
Pde6bP23440 Gm24398-201ENSMUST00000157870 109 ntBASIC12.62□□□□□ -0.39
Pde6bP23440 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6bP23440 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6bP23440 Gm9136-201ENSMUST00000193368 454 ntBASIC12.62□□□□□ -0.39
Pde6bP23440 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC12.62□□□□□ -0.39
Pde6bP23440 Gm8574-201ENSMUST00000203207 924 ntBASIC12.62□□□□□ -0.39
Pde6bP23440 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC12.62□□□□□ -0.39
Pde6bP23440 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6bP23440 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Pde6bP23440 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Pde6bP23440 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6bP23440 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6bP23440 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Pde6bP23440 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6bP23440 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6bP23440 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6bP23440 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Pde6bP23440 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6bP23440 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6bP23440 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6bP23440 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6bP23440 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pde6bP23440 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pde6bP23440 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Pde6bP23440 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pde6bP23440 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pde6bP23440 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Pde6bP23440 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pde6bP23440 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pde6bP23440 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Pde6bP23440 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pde6bP23440 Gm13937-201ENSMUST00000121000 988 ntBASIC12.61□□□□□ -0.39
Pde6bP23440 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC12.61□□□□□ -0.39
Pde6bP23440 Gm9089-201ENSMUST00000122027 526 ntBASIC12.61□□□□□ -0.39
Pde6bP23440 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 297.5 ms