Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC17.08■□□□□ 0.32
NclP09405 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC17.08■□□□□ 0.32
NclP09405 Gm5468-202ENSMUST00000227851 682 ntBASIC17.08■□□□□ 0.32
NclP09405 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NclP09405 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
NclP09405 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NclP09405 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
NclP09405 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NclP09405 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC17.08■□□□□ 0.32
NclP09405 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NclP09405 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
NclP09405 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NclP09405 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NclP09405 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC17.07■□□□□ 0.32
NclP09405 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NclP09405 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NclP09405 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NclP09405 AC164702.1-201ENSMUST00000220135 2212 ntBASIC17.07■□□□□ 0.32
NclP09405 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC17.07■□□□□ 0.32
NclP09405 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
NclP09405 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
NclP09405 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC17.07■□□□□ 0.32
NclP09405 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC17.07■□□□□ 0.32
NclP09405 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NclP09405 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC17.07■□□□□ 0.32
NclP09405 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NclP09405 Gm26134-201ENSMUST00000178484 110 ntBASIC17.07■□□□□ 0.32
NclP09405 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NclP09405 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NclP09405 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC17.07■□□□□ 0.32
NclP09405 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NclP09405 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC17.07■□□□□ 0.32
NclP09405 AC165154.1-201ENSMUST00000226661 340 ntBASIC17.07■□□□□ 0.32
NclP09405 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NclP09405 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NclP09405 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NclP09405 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NclP09405 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NclP09405 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NclP09405 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
NclP09405 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NclP09405 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NclP09405 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
NclP09405 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NclP09405 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
NclP09405 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC17.06■□□□□ 0.32
NclP09405 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NclP09405 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NclP09405 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NclP09405 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
NclP09405 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NclP09405 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NclP09405 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NclP09405 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC17.06■□□□□ 0.32
NclP09405 Gm14892-201ENSMUST00000117636 267 ntBASIC17.06■□□□□ 0.32
NclP09405 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NclP09405 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC17.06■□□□□ 0.32
NclP09405 Gm37028-201ENSMUST00000194276 107 ntBASIC17.06■□□□□ 0.32
NclP09405 CT009536.2-201ENSMUST00000225370 665 ntBASIC17.06■□□□□ 0.32
NclP09405 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NclP09405 Gm9873-201ENSMUST00000063891 1097 ntBASIC17.06■□□□□ 0.32
NclP09405 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC17.06■□□□□ 0.32
NclP09405 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC17.06■□□□□ 0.32
NclP09405 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NclP09405 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NclP09405 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
NclP09405 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NclP09405 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NclP09405 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NclP09405 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NclP09405 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
NclP09405 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NclP09405 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NclP09405 Gm43727-201ENSMUST00000198021 2647 ntBASIC17.05■□□□□ 0.32
NclP09405 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC17.05■□□□□ 0.32
NclP09405 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
NclP09405 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
NclP09405 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NclP09405 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NclP09405 Gm4993-201ENSMUST00000118719 1174 ntBASIC17.05■□□□□ 0.32
NclP09405 n-R5s84-201ENSMUST00000122591 109 ntBASIC17.05■□□□□ 0.32
NclP09405 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC17.05■□□□□ 0.32
NclP09405 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NclP09405 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC17.05■□□□□ 0.32
NclP09405 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC17.05■□□□□ 0.32
NclP09405 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC17.05■□□□□ 0.32
NclP09405 Gm3028-201ENSMUST00000213805 1119 ntBASIC17.05■□□□□ 0.32
NclP09405 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NclP09405 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC17.05■□□□□ 0.32
NclP09405 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
NclP09405 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
NclP09405 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
NclP09405 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NclP09405 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NclP09405 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NclP09405 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NclP09405 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC17.05■□□□□ 0.32
NclP09405 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NclP09405 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
NclP09405 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms