Protein–RNA interactions for Protein: P07309

Ttr, Transthyretin, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TtrP07309 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
TtrP07309 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
TtrP07309 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC8.3□□□□□ -1.08
TtrP07309 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC8.3□□□□□ -1.08
TtrP07309 Gm12490-201ENSMUST00000120255 560 ntBASIC8.3□□□□□ -1.08
TtrP07309 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC8.3□□□□□ -1.08
TtrP07309 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC8.3□□□□□ -1.08
TtrP07309 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC8.3□□□□□ -1.08
TtrP07309 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC8.3□□□□□ -1.08
TtrP07309 Gm25261-201ENSMUST00000157416 134 ntBASIC8.3□□□□□ -1.08
TtrP07309 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
TtrP07309 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
TtrP07309 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
TtrP07309 Gm9192-201ENSMUST00000183221 985 ntBASIC8.3□□□□□ -1.08
TtrP07309 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC8.3□□□□□ -1.08
TtrP07309 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC8.3□□□□□ -1.08
TtrP07309 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
TtrP07309 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC8.3□□□□□ -1.08
TtrP07309 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
TtrP07309 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
TtrP07309 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
TtrP07309 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
TtrP07309 AC091458.1-201ENSMUST00000220902 1361 ntBASIC8.3□□□□□ -1.08
TtrP07309 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
TtrP07309 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC8.3□□□□□ -1.08
TtrP07309 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
TtrP07309 Lrat-201ENSMUST00000029632 5351 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
TtrP07309 Usp45-202ENSMUST00000065111 6003 ntAPPRIS P3 TSL 5 BASIC8.3□□□□□ -1.08
TtrP07309 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
TtrP07309 Astn1-201ENSMUST00000046110 7195 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
TtrP07309 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
TtrP07309 Gm18806-201ENSMUST00000207607 1775 ntBASIC8.3□□□□□ -1.08
TtrP07309 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
TtrP07309 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
TtrP07309 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
TtrP07309 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
TtrP07309 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
TtrP07309 Ciapin1-209ENSMUST00000162538 4359 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
TtrP07309 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
TtrP07309 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
TtrP07309 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC8.29□□□□□ -1.08
TtrP07309 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
TtrP07309 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC8.29□□□□□ -1.08
TtrP07309 Myo1c-203ENSMUST00000102505 4652 ntAPPRIS ALT1 TSL 5 BASIC8.29□□□□□ -1.08
TtrP07309 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
TtrP07309 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC8.29□□□□□ -1.08
TtrP07309 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
TtrP07309 Gm14005-209ENSMUST00000224993 1832 ntBASIC8.29□□□□□ -1.08
TtrP07309 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
TtrP07309 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
TtrP07309 Cd163-201ENSMUST00000032234 4404 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
TtrP07309 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
TtrP07309 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC8.29□□□□□ -1.08
TtrP07309 Pnpla3-201ENSMUST00000045289 4640 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
TtrP07309 Erich3-203ENSMUST00000189969 3460 ntBASIC8.29□□□□□ -1.08
TtrP07309 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
TtrP07309 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
TtrP07309 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
TtrP07309 Gm38292-201ENSMUST00000192646 3045 ntBASIC8.29□□□□□ -1.08
TtrP07309 Limch1-202ENSMUST00000101164 5192 ntAPPRIS P2 TSL 5 BASIC8.29□□□□□ -1.08
TtrP07309 Ctnnd1-223ENSMUST00000111697 5294 ntTSL 5 BASIC8.29□□□□□ -1.08
TtrP07309 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
TtrP07309 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC8.29□□□□□ -1.08
TtrP07309 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
TtrP07309 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
TtrP07309 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
TtrP07309 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC8.29□□□□□ -1.08
TtrP07309 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC8.29□□□□□ -1.08
TtrP07309 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
TtrP07309 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
TtrP07309 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
TtrP07309 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
TtrP07309 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC8.29□□□□□ -1.08
TtrP07309 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
TtrP07309 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC8.29□□□□□ -1.08
TtrP07309 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC8.29□□□□□ -1.08
TtrP07309 Gm19963-201ENSMUST00000208413 1255 ntBASIC8.29□□□□□ -1.08
TtrP07309 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC8.29□□□□□ -1.08
TtrP07309 CT571245.2-201ENSMUST00000218421 305 ntBASIC8.29□□□□□ -1.08
TtrP07309 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
TtrP07309 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
TtrP07309 Prdm10-204ENSMUST00000215499 6772 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
TtrP07309 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
TtrP07309 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
TtrP07309 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
TtrP07309 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
TtrP07309 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC8.29□□□□□ -1.08
TtrP07309 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
TtrP07309 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
TtrP07309 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
TtrP07309 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
TtrP07309 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
TtrP07309 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
TtrP07309 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC8.29□□□□□ -1.08
TtrP07309 Rpgrip1-201ENSMUST00000111600 4565 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
TtrP07309 Tmem33-201ENSMUST00000037918 6247 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
TtrP07309 Zzef1-201ENSMUST00000069395 11150 ntAPPRIS P2 TSL 5 BASIC8.29□□□□□ -1.08
TtrP07309 AC154314.2-201ENSMUST00000223677 3502 ntBASIC8.29□□□□□ -1.08
TtrP07309 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC8.29□□□□□ -1.08
TtrP07309 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms