Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Gm42498-201ENSMUST00000199981 1372 ntBASIC14.67□□□□□ -0.06
Ubr1O70481 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Ubr1O70481 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ubr1O70481 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ubr1O70481 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ubr1O70481 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ubr1O70481 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ubr1O70481 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ubr1O70481 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Ubr1O70481 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ubr1O70481 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC14.66□□□□□ -0.06
Ubr1O70481 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ubr1O70481 Gm43174-201ENSMUST00000195914 2445 ntBASIC14.66□□□□□ -0.06
Ubr1O70481 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Ubr1O70481 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ubr1O70481 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ubr1O70481 Gm11919-201ENSMUST00000117609 721 ntBASIC14.66□□□□□ -0.06
Ubr1O70481 Gm13094-201ENSMUST00000117930 409 ntBASIC14.66□□□□□ -0.06
Ubr1O70481 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC14.66□□□□□ -0.06
Ubr1O70481 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ubr1O70481 Gm26782-203ENSMUST00000227103 751 ntBASIC14.66□□□□□ -0.06
Ubr1O70481 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ubr1O70481 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ubr1O70481 Olfr1313-201ENSMUST00000099599 938 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Ubr1O70481 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ubr1O70481 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ubr1O70481 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Ubr1O70481 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ubr1O70481 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ubr1O70481 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ubr1O70481 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Ubr1O70481 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ubr1O70481 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ubr1O70481 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ubr1O70481 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ubr1O70481 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ubr1O70481 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ubr1O70481 C130083M11Rik-201ENSMUST00000197171 2072 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ubr1O70481 Gm42751-201ENSMUST00000198065 559 ntBASIC14.65□□□□□ -0.06
Ubr1O70481 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC14.65□□□□□ -0.06
Ubr1O70481 Olfr160-202ENSMUST00000211952 3492 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
Ubr1O70481 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ubr1O70481 AC137871.1-201ENSMUST00000228278 475 ntBASIC14.65□□□□□ -0.06
Ubr1O70481 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ubr1O70481 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Ubr1O70481 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ubr1O70481 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ubr1O70481 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ubr1O70481 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC14.65□□□□□ -0.06
Ubr1O70481 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ubr1O70481 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ubr1O70481 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ubr1O70481 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ubr1O70481 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ubr1O70481 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ubr1O70481 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC14.65□□□□□ -0.06
Ubr1O70481 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ubr1O70481 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ubr1O70481 Adh6-ps1-202ENSMUST00000196293 754 ntBASIC14.65□□□□□ -0.06
Ubr1O70481 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ubr1O70481 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Ubr1O70481 Gm5766-201ENSMUST00000160520 1977 ntBASIC14.64□□□□□ -0.07
Ubr1O70481 4932438H23Rik-201ENSMUST00000035689 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ubr1O70481 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ubr1O70481 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ubr1O70481 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ubr1O70481 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ubr1O70481 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ubr1O70481 Gm9166-201ENSMUST00000120293 561 ntBASIC14.64□□□□□ -0.07
Ubr1O70481 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ubr1O70481 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ubr1O70481 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC14.64□□□□□ -0.07
Ubr1O70481 Has2os-202ENSMUST00000163314 633 ntTSL 3 BASIC14.64□□□□□ -0.07
Ubr1O70481 Mir8091-201ENSMUST00000183602 139 ntBASIC14.64□□□□□ -0.07
Ubr1O70481 Mrgprb7-ps-201ENSMUST00000190238 964 ntBASIC14.64□□□□□ -0.07
Ubr1O70481 Gm18001-201ENSMUST00000212023 688 ntBASIC14.64□□□□□ -0.07
Ubr1O70481 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC14.64□□□□□ -0.07
Ubr1O70481 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC14.64□□□□□ -0.07
Ubr1O70481 AC154461.3-201ENSMUST00000224831 573 ntBASIC14.64□□□□□ -0.07
Ubr1O70481 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ubr1O70481 AC156790.2-201ENSMUST00000227115 568 ntBASIC14.64□□□□□ -0.07
Ubr1O70481 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ubr1O70481 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ubr1O70481 Olfr1015-201ENSMUST00000047870 1016 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Ubr1O70481 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ubr1O70481 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ubr1O70481 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
Ubr1O70481 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ubr1O70481 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ubr1O70481 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC14.64□□□□□ -0.07
Ubr1O70481 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ubr1O70481 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ubr1O70481 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ubr1O70481 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ubr1O70481 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Ubr1O70481 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ubr1O70481 Ino80dos-201ENSMUST00000138611 1576 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ubr1O70481 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ubr1O70481 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Ubr1O70481 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms