Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Gm14441-201ENSMUST00000121960 540 ntBASIC12.58□□□□□ -0.4
Ssr1Q9CY50 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.58□□□□□ -0.4
Ssr1Q9CY50 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ssr1Q9CY50 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Ssr1Q9CY50 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC12.58□□□□□ -0.4
Ssr1Q9CY50 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ssr1Q9CY50 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.58□□□□□ -0.4
Ssr1Q9CY50 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.58□□□□□ -0.4
Ssr1Q9CY50 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.58□□□□□ -0.4
Ssr1Q9CY50 Gm38241-201ENSMUST00000192641 898 ntBASIC12.58□□□□□ -0.4
Ssr1Q9CY50 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Ssr1Q9CY50 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ssr1Q9CY50 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ssr1Q9CY50 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.58□□□□□ -0.4
Ssr1Q9CY50 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC12.58□□□□□ -0.4
Ssr1Q9CY50 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.58□□□□□ -0.4
Ssr1Q9CY50 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ssr1Q9CY50 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ssr1Q9CY50 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ssr1Q9CY50 Mthfr-201ENSMUST00000069604 6072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ssr1Q9CY50 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ssr1Q9CY50 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC12.58□□□□□ -0.4
Ssr1Q9CY50 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12.58□□□□□ -0.4
Ssr1Q9CY50 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ssr1Q9CY50 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
Ssr1Q9CY50 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC12.58□□□□□ -0.4
Ssr1Q9CY50 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.58□□□□□ -0.4
Ssr1Q9CY50 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ssr1Q9CY50 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ssr1Q9CY50 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ssr1Q9CY50 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ssr1Q9CY50 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.58□□□□□ -0.4
Ssr1Q9CY50 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ssr1Q9CY50 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ssr1Q9CY50 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Ssr1Q9CY50 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssr1Q9CY50 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssr1Q9CY50 Erich3-203ENSMUST00000189969 3460 ntBASIC12.57□□□□□ -0.4
Ssr1Q9CY50 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssr1Q9CY50 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssr1Q9CY50 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Ssr1Q9CY50 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC12.57□□□□□ -0.4
Ssr1Q9CY50 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
Ssr1Q9CY50 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssr1Q9CY50 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssr1Q9CY50 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssr1Q9CY50 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssr1Q9CY50 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC12.57□□□□□ -0.4
Ssr1Q9CY50 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC12.57□□□□□ -0.4
Ssr1Q9CY50 Gm12015-201ENSMUST00000117065 843 ntBASIC12.57□□□□□ -0.4
Ssr1Q9CY50 Gm11930-201ENSMUST00000117788 190 ntBASIC12.57□□□□□ -0.4
Ssr1Q9CY50 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssr1Q9CY50 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.57□□□□□ -0.4
Ssr1Q9CY50 Gm6963-201ENSMUST00000147879 379 ntBASIC12.57□□□□□ -0.4
Ssr1Q9CY50 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ssr1Q9CY50 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.57□□□□□ -0.4
Ssr1Q9CY50 Gm5186-201ENSMUST00000218781 920 ntBASIC12.57□□□□□ -0.4
Ssr1Q9CY50 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ssr1Q9CY50 Gp1ba-202ENSMUST00000108551 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssr1Q9CY50 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssr1Q9CY50 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssr1Q9CY50 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssr1Q9CY50 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssr1Q9CY50 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssr1Q9CY50 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssr1Q9CY50 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.57□□□□□ -0.4
Ssr1Q9CY50 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.57□□□□□ -0.4
Ssr1Q9CY50 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssr1Q9CY50 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssr1Q9CY50 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Ssr1Q9CY50 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssr1Q9CY50 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ssr1Q9CY50 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Ssr1Q9CY50 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ssr1Q9CY50 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ssr1Q9CY50 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Ssr1Q9CY50 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ssr1Q9CY50 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Ssr1Q9CY50 Gm45597-201ENSMUST00000211524 1994 ntBASIC12.56□□□□□ -0.4
Ssr1Q9CY50 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Ssr1Q9CY50 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ssr1Q9CY50 Adat1-201ENSMUST00000034427 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ssr1Q9CY50 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ssr1Q9CY50 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ssr1Q9CY50 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ssr1Q9CY50 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ssr1Q9CY50 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ssr1Q9CY50 Gm11700-201ENSMUST00000119409 403 ntBASIC12.56□□□□□ -0.4
Ssr1Q9CY50 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.56□□□□□ -0.4
Ssr1Q9CY50 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.56□□□□□ -0.4
Ssr1Q9CY50 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ssr1Q9CY50 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.56□□□□□ -0.4
Ssr1Q9CY50 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.56□□□□□ -0.4
Ssr1Q9CY50 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Ssr1Q9CY50 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.56□□□□□ -0.4
Ssr1Q9CY50 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.56□□□□□ -0.4
Ssr1Q9CY50 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.56□□□□□ -0.4
Ssr1Q9CY50 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ssr1Q9CY50 Cts7-204ENSMUST00000225321 1257 ntBASIC12.56□□□□□ -0.4
Ssr1Q9CY50 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms