Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Khdc3Q9CWU5 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Khdc3Q9CWU5 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Khdc3Q9CWU5 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.07□□□□□ -0.64
Khdc3Q9CWU5 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Khdc3Q9CWU5 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Khdc3Q9CWU5 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Khdc3Q9CWU5 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Khdc3Q9CWU5 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Khdc3Q9CWU5 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Khdc3Q9CWU5 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Khdc3Q9CWU5 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.07□□□□□ -0.64
Khdc3Q9CWU5 CU062626.3-201ENSMUST00000225522 1411 ntBASIC11.07□□□□□ -0.64
Khdc3Q9CWU5 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Khdc3Q9CWU5 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Khdc3Q9CWU5 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Khdc3Q9CWU5 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Khdc3Q9CWU5 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Khdc3Q9CWU5 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Khdc3Q9CWU5 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.07□□□□□ -0.64
Khdc3Q9CWU5 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Khdc3Q9CWU5 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Khdc3Q9CWU5 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Khdc3Q9CWU5 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Khdc3Q9CWU5 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Khdc3Q9CWU5 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Khdc3Q9CWU5 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Khdc3Q9CWU5 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.06□□□□□ -0.64
Khdc3Q9CWU5 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Khdc3Q9CWU5 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC11.06□□□□□ -0.64
Khdc3Q9CWU5 Aspm-201ENSMUST00000053364 9867 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Khdc3Q9CWU5 Gm45199-201ENSMUST00000207640 1507 ntBASIC11.06□□□□□ -0.64
Khdc3Q9CWU5 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Khdc3Q9CWU5 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Khdc3Q9CWU5 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Khdc3Q9CWU5 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Khdc3Q9CWU5 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Khdc3Q9CWU5 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Khdc3Q9CWU5 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
Khdc3Q9CWU5 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC11.06□□□□□ -0.64
Khdc3Q9CWU5 Gm8566-201ENSMUST00000120174 465 ntBASIC11.06□□□□□ -0.64
Khdc3Q9CWU5 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.06□□□□□ -0.64
Khdc3Q9CWU5 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.06□□□□□ -0.64
Khdc3Q9CWU5 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Khdc3Q9CWU5 Gm27341-201ENSMUST00000183570 106 ntBASIC11.06□□□□□ -0.64
Khdc3Q9CWU5 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Khdc3Q9CWU5 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Khdc3Q9CWU5 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC11.06□□□□□ -0.64
Khdc3Q9CWU5 Lect2-202ENSMUST00000225183 823 ntBASIC11.06□□□□□ -0.64
Khdc3Q9CWU5 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Khdc3Q9CWU5 Mir433-201ENSMUST00000093564 124 ntBASIC11.06□□□□□ -0.64
Khdc3Q9CWU5 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Khdc3Q9CWU5 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC11.06□□□□□ -0.64
Khdc3Q9CWU5 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Khdc3Q9CWU5 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Khdc3Q9CWU5 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Khdc3Q9CWU5 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Khdc3Q9CWU5 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Khdc3Q9CWU5 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.06□□□□□ -0.64
Khdc3Q9CWU5 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Khdc3Q9CWU5 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Khdc3Q9CWU5 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC11.06□□□□□ -0.64
Khdc3Q9CWU5 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
Khdc3Q9CWU5 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Khdc3Q9CWU5 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Khdc3Q9CWU5 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Khdc3Q9CWU5 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Khdc3Q9CWU5 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Khdc3Q9CWU5 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Khdc3Q9CWU5 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
Khdc3Q9CWU5 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Khdc3Q9CWU5 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Khdc3Q9CWU5 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Khdc3Q9CWU5 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Khdc3Q9CWU5 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Khdc3Q9CWU5 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Khdc3Q9CWU5 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
Khdc3Q9CWU5 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Khdc3Q9CWU5 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Khdc3Q9CWU5 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Khdc3Q9CWU5 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Khdc3Q9CWU5 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Khdc3Q9CWU5 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Khdc3Q9CWU5 Gm11439-201ENSMUST00000118598 409 ntBASIC11.05□□□□□ -0.64
Khdc3Q9CWU5 Gm16481-201ENSMUST00000119074 1227 ntBASIC11.05□□□□□ -0.64
Khdc3Q9CWU5 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
Khdc3Q9CWU5 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
Khdc3Q9CWU5 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Khdc3Q9CWU5 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC11.05□□□□□ -0.64
Khdc3Q9CWU5 Mir8093-201ENSMUST00000185043 137 ntBASIC11.05□□□□□ -0.64
Khdc3Q9CWU5 Gm28450-201ENSMUST00000187349 638 ntBASIC11.05□□□□□ -0.64
Khdc3Q9CWU5 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
Khdc3Q9CWU5 Gm45575-201ENSMUST00000210283 548 ntBASIC11.05□□□□□ -0.64
Khdc3Q9CWU5 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC11.05□□□□□ -0.64
Khdc3Q9CWU5 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Khdc3Q9CWU5 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Khdc3Q9CWU5 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Khdc3Q9CWU5 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Khdc3Q9CWU5 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC11.05□□□□□ -0.64
Khdc3Q9CWU5 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms