Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC12.94□□□□□ -0.34
Smc1aQ9CU62 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smc1aQ9CU62 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Smc1aQ9CU62 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.94□□□□□ -0.34
Smc1aQ9CU62 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Smc1aQ9CU62 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smc1aQ9CU62 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC12.94□□□□□ -0.34
Smc1aQ9CU62 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.94□□□□□ -0.34
Smc1aQ9CU62 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.94□□□□□ -0.34
Smc1aQ9CU62 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Smc1aQ9CU62 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Smc1aQ9CU62 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smc1aQ9CU62 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Smc1aQ9CU62 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Smc1aQ9CU62 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smc1aQ9CU62 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Smc1aQ9CU62 AC124397.2-201ENSMUST00000225575 2215 ntBASIC12.94□□□□□ -0.34
Smc1aQ9CU62 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Smc1aQ9CU62 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smc1aQ9CU62 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smc1aQ9CU62 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smc1aQ9CU62 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smc1aQ9CU62 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smc1aQ9CU62 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smc1aQ9CU62 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Smc1aQ9CU62 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smc1aQ9CU62 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Smc1aQ9CU62 Gm43522-201ENSMUST00000196697 1922 ntBASIC12.94□□□□□ -0.34
Smc1aQ9CU62 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smc1aQ9CU62 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smc1aQ9CU62 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.93□□□□□ -0.34
Smc1aQ9CU62 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Smc1aQ9CU62 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
Smc1aQ9CU62 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Smc1aQ9CU62 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.93□□□□□ -0.34
Smc1aQ9CU62 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smc1aQ9CU62 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Smc1aQ9CU62 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Smc1aQ9CU62 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Smc1aQ9CU62 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smc1aQ9CU62 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC12.93□□□□□ -0.34
Smc1aQ9CU62 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smc1aQ9CU62 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Smc1aQ9CU62 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smc1aQ9CU62 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smc1aQ9CU62 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smc1aQ9CU62 Gm23596-201ENSMUST00000104304 132 ntBASIC12.93□□□□□ -0.34
Smc1aQ9CU62 Gm7851-201ENSMUST00000117574 323 ntBASIC12.93□□□□□ -0.34
Smc1aQ9CU62 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.93□□□□□ -0.34
Smc1aQ9CU62 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Smc1aQ9CU62 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Smc1aQ9CU62 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Smc1aQ9CU62 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Smc1aQ9CU62 Gm43184-201ENSMUST00000197247 542 ntBASIC12.93□□□□□ -0.34
Smc1aQ9CU62 Gm4482-201ENSMUST00000200876 742 ntBASIC12.93□□□□□ -0.34
Smc1aQ9CU62 Gm44551-201ENSMUST00000208804 171 ntBASIC12.93□□□□□ -0.34
Smc1aQ9CU62 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.93□□□□□ -0.34
Smc1aQ9CU62 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC12.93□□□□□ -0.34
Smc1aQ9CU62 AC159103.1-201ENSMUST00000228325 429 ntBASIC12.93□□□□□ -0.34
Smc1aQ9CU62 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smc1aQ9CU62 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smc1aQ9CU62 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smc1aQ9CU62 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Smc1aQ9CU62 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smc1aQ9CU62 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smc1aQ9CU62 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smc1aQ9CU62 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC12.93□□□□□ -0.34
Smc1aQ9CU62 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smc1aQ9CU62 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Smc1aQ9CU62 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smc1aQ9CU62 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smc1aQ9CU62 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
Smc1aQ9CU62 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smc1aQ9CU62 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Smc1aQ9CU62 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Smc1aQ9CU62 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Smc1aQ9CU62 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Smc1aQ9CU62 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Smc1aQ9CU62 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Smc1aQ9CU62 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC12.92□□□□□ -0.34
Smc1aQ9CU62 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smc1aQ9CU62 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smc1aQ9CU62 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smc1aQ9CU62 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smc1aQ9CU62 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Smc1aQ9CU62 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Smc1aQ9CU62 Gm11667-201ENSMUST00000119828 486 ntBASIC12.92□□□□□ -0.34
Smc1aQ9CU62 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Smc1aQ9CU62 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Smc1aQ9CU62 Gm43916-201ENSMUST00000205062 967 ntBASIC12.92□□□□□ -0.34
Smc1aQ9CU62 Gm6905-201ENSMUST00000205729 511 ntBASIC12.92□□□□□ -0.34
Smc1aQ9CU62 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Smc1aQ9CU62 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Smc1aQ9CU62 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smc1aQ9CU62 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smc1aQ9CU62 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smc1aQ9CU62 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Smc1aQ9CU62 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
Smc1aQ9CU62 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smc1aQ9CU62 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms