Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC10.93□□□□□ -0.66
Chmp1b1Q99LU0 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chmp1b1Q99LU0 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chmp1b1Q99LU0 Bcl9-201ENSMUST00000046521 6102 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chmp1b1Q99LU0 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chmp1b1Q99LU0 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chmp1b1Q99LU0 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chmp1b1Q99LU0 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chmp1b1Q99LU0 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chmp1b1Q99LU0 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chmp1b1Q99LU0 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Chmp1b1Q99LU0 Gm40377-201ENSMUST00000204604 2015 ntBASIC10.92□□□□□ -0.66
Chmp1b1Q99LU0 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Chmp1b1Q99LU0 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chmp1b1Q99LU0 Fubp1-202ENSMUST00000166984 6523 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chmp1b1Q99LU0 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chmp1b1Q99LU0 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Chmp1b1Q99LU0 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chmp1b1Q99LU0 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chmp1b1Q99LU0 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Chmp1b1Q99LU0 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC10.92□□□□□ -0.66
Chmp1b1Q99LU0 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chmp1b1Q99LU0 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Chmp1b1Q99LU0 Ptbp3-201ENSMUST00000030076 6855 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chmp1b1Q99LU0 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chmp1b1Q99LU0 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chmp1b1Q99LU0 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Chmp1b1Q99LU0 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC10.92□□□□□ -0.66
Chmp1b1Q99LU0 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
Chmp1b1Q99LU0 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chmp1b1Q99LU0 Gm14441-201ENSMUST00000121960 540 ntBASIC10.92□□□□□ -0.66
Chmp1b1Q99LU0 Gm24749-201ENSMUST00000157838 343 ntBASIC10.92□□□□□ -0.66
Chmp1b1Q99LU0 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC10.92□□□□□ -0.66
Chmp1b1Q99LU0 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC10.92□□□□□ -0.66
Chmp1b1Q99LU0 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chmp1b1Q99LU0 Gm28686-201ENSMUST00000187404 609 ntBASIC10.92□□□□□ -0.66
Chmp1b1Q99LU0 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chmp1b1Q99LU0 Gm42629-201ENSMUST00000199063 1102 ntBASIC10.92□□□□□ -0.66
Chmp1b1Q99LU0 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
Chmp1b1Q99LU0 Gm18730-201ENSMUST00000218038 343 ntBASIC10.92□□□□□ -0.66
Chmp1b1Q99LU0 Gm5705-201ENSMUST00000066241 711 ntBASIC10.92□□□□□ -0.66
Chmp1b1Q99LU0 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC10.92□□□□□ -0.66
Chmp1b1Q99LU0 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chmp1b1Q99LU0 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chmp1b1Q99LU0 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Chmp1b1Q99LU0 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Chmp1b1Q99LU0 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chmp1b1Q99LU0 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chmp1b1Q99LU0 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Chmp1b1Q99LU0 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chmp1b1Q99LU0 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chmp1b1Q99LU0 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Chmp1b1Q99LU0 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Chmp1b1Q99LU0 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chmp1b1Q99LU0 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chmp1b1Q99LU0 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chmp1b1Q99LU0 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chmp1b1Q99LU0 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chmp1b1Q99LU0 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Chmp1b1Q99LU0 Gne-201ENSMUST00000030201 5384 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Chmp1b1Q99LU0 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chmp1b1Q99LU0 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
Chmp1b1Q99LU0 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chmp1b1Q99LU0 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chmp1b1Q99LU0 Adgrl3-204ENSMUST00000117407 5705 ntTSL 5 BASIC10.91□□□□□ -0.66
Chmp1b1Q99LU0 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Chmp1b1Q99LU0 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chmp1b1Q99LU0 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Chmp1b1Q99LU0 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chmp1b1Q99LU0 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chmp1b1Q99LU0 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Chmp1b1Q99LU0 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Chmp1b1Q99LU0 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chmp1b1Q99LU0 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC10.91□□□□□ -0.66
Chmp1b1Q99LU0 Gm11700-201ENSMUST00000119409 403 ntBASIC10.91□□□□□ -0.66
Chmp1b1Q99LU0 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chmp1b1Q99LU0 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC10.91□□□□□ -0.66
Chmp1b1Q99LU0 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC10.91□□□□□ -0.66
Chmp1b1Q99LU0 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Chmp1b1Q99LU0 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC10.91□□□□□ -0.66
Chmp1b1Q99LU0 Gm5616-201ENSMUST00000165252 384 ntBASIC10.91□□□□□ -0.66
Chmp1b1Q99LU0 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Chmp1b1Q99LU0 Gm8741-201ENSMUST00000174736 384 ntBASIC10.91□□□□□ -0.66
Chmp1b1Q99LU0 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chmp1b1Q99LU0 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Chmp1b1Q99LU0 Gm9034-201ENSMUST00000182071 1005 ntBASIC10.91□□□□□ -0.66
Chmp1b1Q99LU0 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Chmp1b1Q99LU0 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC10.91□□□□□ -0.66
Chmp1b1Q99LU0 Gstp-ps-201ENSMUST00000195526 631 ntBASIC10.91□□□□□ -0.66
Chmp1b1Q99LU0 Gm37466-201ENSMUST00000195692 652 ntBASIC10.91□□□□□ -0.66
Chmp1b1Q99LU0 Olfr1347-205ENSMUST00000220413 964 ntBASIC10.91□□□□□ -0.66
Chmp1b1Q99LU0 CT485787.1-201ENSMUST00000225617 968 ntBASIC10.91□□□□□ -0.66
Chmp1b1Q99LU0 Mettl6-204ENSMUST00000227595 1027 ntBASIC10.91□□□□□ -0.66
Chmp1b1Q99LU0 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Chmp1b1Q99LU0 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chmp1b1Q99LU0 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Chmp1b1Q99LU0 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chmp1b1Q99LU0 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chmp1b1Q99LU0 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chmp1b1Q99LU0 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms