Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC11.61□□□□□ -0.55
Cdk9Q99J95 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.61□□□□□ -0.55
Cdk9Q99J95 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.61□□□□□ -0.55
Cdk9Q99J95 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.61□□□□□ -0.55
Cdk9Q99J95 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdk9Q99J95 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Cdk9Q99J95 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cdk9Q99J95 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdk9Q99J95 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.61□□□□□ -0.55
Cdk9Q99J95 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdk9Q99J95 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Cdk9Q99J95 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdk9Q99J95 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdk9Q99J95 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdk9Q99J95 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cdk9Q99J95 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdk9Q99J95 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdk9Q99J95 AC169511.2-201ENSMUST00000226674 2063 ntBASIC11.61□□□□□ -0.55
Cdk9Q99J95 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cdk9Q99J95 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdk9Q99J95 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdk9Q99J95 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdk9Q99J95 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.6□□□□□ -0.55
Cdk9Q99J95 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdk9Q99J95 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Cdk9Q99J95 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdk9Q99J95 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Cdk9Q99J95 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Cdk9Q99J95 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdk9Q99J95 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdk9Q99J95 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdk9Q99J95 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.6□□□□□ -0.55
Cdk9Q99J95 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Cdk9Q99J95 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdk9Q99J95 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.6□□□□□ -0.55
Cdk9Q99J95 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdk9Q99J95 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdk9Q99J95 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Cdk9Q99J95 Gm13316-201ENSMUST00000140537 691 ntBASIC11.6□□□□□ -0.55
Cdk9Q99J95 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cdk9Q99J95 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC11.6□□□□□ -0.55
Cdk9Q99J95 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cdk9Q99J95 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.6□□□□□ -0.55
Cdk9Q99J95 Gm6114-201ENSMUST00000182472 968 ntBASIC11.6□□□□□ -0.55
Cdk9Q99J95 Gm27501-201ENSMUST00000183599 107 ntBASIC11.6□□□□□ -0.55
Cdk9Q99J95 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.6□□□□□ -0.55
Cdk9Q99J95 Gm43179-201ENSMUST00000198797 275 ntBASIC11.6□□□□□ -0.55
Cdk9Q99J95 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cdk9Q99J95 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cdk9Q99J95 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdk9Q99J95 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdk9Q99J95 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdk9Q99J95 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdk9Q99J95 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdk9Q99J95 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdk9Q99J95 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdk9Q99J95 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC11.6□□□□□ -0.55
Cdk9Q99J95 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Cdk9Q99J95 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cdk9Q99J95 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdk9Q99J95 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdk9Q99J95 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
Cdk9Q99J95 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdk9Q99J95 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdk9Q99J95 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdk9Q99J95 Gm6203-201ENSMUST00000209575 1342 ntBASIC11.6□□□□□ -0.55
Cdk9Q99J95 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdk9Q99J95 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdk9Q99J95 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdk9Q99J95 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdk9Q99J95 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdk9Q99J95 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdk9Q99J95 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC11.59□□□□□ -0.55
Cdk9Q99J95 Gm14023-201ENSMUST00000144178 1781 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cdk9Q99J95 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.59□□□□□ -0.55
Cdk9Q99J95 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdk9Q99J95 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cdk9Q99J95 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Cdk9Q99J95 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdk9Q99J95 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdk9Q99J95 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdk9Q99J95 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdk9Q99J95 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdk9Q99J95 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Cdk9Q99J95 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Cdk9Q99J95 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC11.59□□□□□ -0.55
Cdk9Q99J95 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.59□□□□□ -0.55
Cdk9Q99J95 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC11.59□□□□□ -0.55
Cdk9Q99J95 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdk9Q99J95 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.59□□□□□ -0.55
Cdk9Q99J95 Mir6420-201ENSMUST00000185032 102 ntBASIC11.59□□□□□ -0.55
Cdk9Q99J95 Gm6439-201ENSMUST00000199849 862 ntBASIC11.59□□□□□ -0.55
Cdk9Q99J95 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdk9Q99J95 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdk9Q99J95 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
Cdk9Q99J95 Zcchc7-203ENSMUST00000107824 2503 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Cdk9Q99J95 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Cdk9Q99J95 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Cdk9Q99J95 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdk9Q99J95 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms