Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 AC122346.3-201ENSMUST00000223983 306 ntBASIC12.41□□□□□ -0.42
TraipQ8VIG6 AC165154.1-201ENSMUST00000226661 340 ntBASIC12.41□□□□□ -0.42
TraipQ8VIG6 Prrxl1-205ENSMUST00000228878 723 ntBASIC12.41□□□□□ -0.42
TraipQ8VIG6 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TraipQ8VIG6 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TraipQ8VIG6 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TraipQ8VIG6 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TraipQ8VIG6 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TraipQ8VIG6 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TraipQ8VIG6 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TraipQ8VIG6 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
TraipQ8VIG6 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TraipQ8VIG6 Cphx3-201ENSMUST00000163305 1653 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TraipQ8VIG6 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TraipQ8VIG6 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TraipQ8VIG6 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
TraipQ8VIG6 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TraipQ8VIG6 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
TraipQ8VIG6 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TraipQ8VIG6 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
TraipQ8VIG6 Gm42571-201ENSMUST00000201197 2464 ntBASIC12.4□□□□□ -0.42
TraipQ8VIG6 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.4□□□□□ -0.42
TraipQ8VIG6 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.4□□□□□ -0.42
TraipQ8VIG6 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TraipQ8VIG6 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
TraipQ8VIG6 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
TraipQ8VIG6 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TraipQ8VIG6 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TraipQ8VIG6 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TraipQ8VIG6 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TraipQ8VIG6 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TraipQ8VIG6 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TraipQ8VIG6 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TraipQ8VIG6 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TraipQ8VIG6 Gm13182-201ENSMUST00000122241 312 ntBASIC12.4□□□□□ -0.42
TraipQ8VIG6 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TraipQ8VIG6 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TraipQ8VIG6 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC12.4□□□□□ -0.42
TraipQ8VIG6 Gm42657-201ENSMUST00000201746 211 ntBASIC12.4□□□□□ -0.42
TraipQ8VIG6 Gm17825-201ENSMUST00000206836 794 ntBASIC12.4□□□□□ -0.42
TraipQ8VIG6 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC12.4□□□□□ -0.42
TraipQ8VIG6 Gm45399-201ENSMUST00000209955 1016 ntBASIC12.4□□□□□ -0.42
TraipQ8VIG6 Gm19009-201ENSMUST00000223072 823 ntBASIC12.4□□□□□ -0.42
TraipQ8VIG6 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
TraipQ8VIG6 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TraipQ8VIG6 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.4□□□□□ -0.42
TraipQ8VIG6 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
TraipQ8VIG6 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TraipQ8VIG6 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TraipQ8VIG6 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TraipQ8VIG6 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
TraipQ8VIG6 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
TraipQ8VIG6 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
TraipQ8VIG6 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
TraipQ8VIG6 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
TraipQ8VIG6 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.39□□□□□ -0.43
TraipQ8VIG6 Gm6655-201ENSMUST00000201932 1309 ntBASIC12.39□□□□□ -0.43
TraipQ8VIG6 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TraipQ8VIG6 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TraipQ8VIG6 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
TraipQ8VIG6 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
TraipQ8VIG6 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
TraipQ8VIG6 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
TraipQ8VIG6 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TraipQ8VIG6 Gm15477-202ENSMUST00000143945 2351 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TraipQ8VIG6 Gm14071-201ENSMUST00000117817 509 ntBASIC12.39□□□□□ -0.43
TraipQ8VIG6 Gm15549-201ENSMUST00000121595 622 ntBASIC12.39□□□□□ -0.43
TraipQ8VIG6 Adgrb3-203ENSMUST00000126626 2953 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TraipQ8VIG6 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC12.39□□□□□ -0.43
TraipQ8VIG6 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC12.39□□□□□ -0.43
TraipQ8VIG6 Gm43058-201ENSMUST00000197645 625 ntBASIC12.39□□□□□ -0.43
TraipQ8VIG6 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TraipQ8VIG6 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC12.39□□□□□ -0.43
TraipQ8VIG6 Gm5996-201ENSMUST00000211110 718 ntBASIC12.39□□□□□ -0.43
TraipQ8VIG6 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TraipQ8VIG6 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC12.39□□□□□ -0.43
TraipQ8VIG6 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TraipQ8VIG6 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TraipQ8VIG6 BC061237-201ENSMUST00000096899 899 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TraipQ8VIG6 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
TraipQ8VIG6 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TraipQ8VIG6 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
TraipQ8VIG6 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.39□□□□□ -0.43
TraipQ8VIG6 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
TraipQ8VIG6 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
TraipQ8VIG6 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
TraipQ8VIG6 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TraipQ8VIG6 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.39□□□□□ -0.43
TraipQ8VIG6 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TraipQ8VIG6 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TraipQ8VIG6 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.39□□□□□ -0.43
TraipQ8VIG6 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC12.39□□□□□ -0.43
TraipQ8VIG6 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
TraipQ8VIG6 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.39□□□□□ -0.43
TraipQ8VIG6 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
TraipQ8VIG6 9630028H03Rik-202ENSMUST00000153402 1559 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TraipQ8VIG6 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.39□□□□□ -0.43
TraipQ8VIG6 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TraipQ8VIG6 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.39□□□□□ -0.43
TraipQ8VIG6 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 126.5 ms