Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Gm37489-201ENSMUST00000191883 159 ntBASIC11.16□□□□□ -0.62
Pcdh18Q8VHR0 Gm18711-201ENSMUST00000199341 750 ntBASIC11.16□□□□□ -0.62
Pcdh18Q8VHR0 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC11.16□□□□□ -0.62
Pcdh18Q8VHR0 Gm10608-202ENSMUST00000213924 676 ntBASIC11.16□□□□□ -0.62
Pcdh18Q8VHR0 Nrp1-201ENSMUST00000026917 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh18Q8VHR0 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh18Q8VHR0 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh18Q8VHR0 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.16□□□□□ -0.62
Pcdh18Q8VHR0 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh18Q8VHR0 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh18Q8VHR0 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh18Q8VHR0 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh18Q8VHR0 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh18Q8VHR0 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh18Q8VHR0 St5-203ENSMUST00000084738 3161 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Pcdh18Q8VHR0 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Pcdh18Q8VHR0 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh18Q8VHR0 Rpgr-202ENSMUST00000072393 2380 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
Pcdh18Q8VHR0 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh18Q8VHR0 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh18Q8VHR0 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh18Q8VHR0 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh18Q8VHR0 Gm3756-201ENSMUST00000169182 1355 ntBASIC11.16□□□□□ -0.62
Pcdh18Q8VHR0 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
Pcdh18Q8VHR0 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC11.15□□□□□ -0.62
Pcdh18Q8VHR0 Itih3-205ENSMUST00000227995 2100 ntAPPRIS ALT2 BASIC11.15□□□□□ -0.62
Pcdh18Q8VHR0 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Pcdh18Q8VHR0 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh18Q8VHR0 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh18Q8VHR0 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Pcdh18Q8VHR0 AC115891.3-201ENSMUST00000219161 2472 ntBASIC11.15□□□□□ -0.62
Pcdh18Q8VHR0 Dffa-201ENSMUST00000030816 2457 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh18Q8VHR0 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh18Q8VHR0 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh18Q8VHR0 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.15□□□□□ -0.62
Pcdh18Q8VHR0 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh18Q8VHR0 AC125409.1-201ENSMUST00000223213 3370 ntBASIC11.15□□□□□ -0.62
Pcdh18Q8VHR0 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh18Q8VHR0 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC11.15□□□□□ -0.62
Pcdh18Q8VHR0 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.15□□□□□ -0.62
Pcdh18Q8VHR0 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Pcdh18Q8VHR0 Diablo-207ENSMUST00000145152 2588 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh18Q8VHR0 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Pcdh18Q8VHR0 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh18Q8VHR0 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Pcdh18Q8VHR0 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC11.15□□□□□ -0.62
Pcdh18Q8VHR0 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh18Q8VHR0 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.15□□□□□ -0.62
Pcdh18Q8VHR0 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.15□□□□□ -0.62
Pcdh18Q8VHR0 Gm8176-201ENSMUST00000191297 1099 ntBASIC11.15□□□□□ -0.62
Pcdh18Q8VHR0 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.15□□□□□ -0.62
Pcdh18Q8VHR0 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh18Q8VHR0 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh18Q8VHR0 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh18Q8VHR0 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh18Q8VHR0 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh18Q8VHR0 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC11.15□□□□□ -0.62
Pcdh18Q8VHR0 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh18Q8VHR0 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh18Q8VHR0 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh18Q8VHR0 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.15□□□□□ -0.62
Pcdh18Q8VHR0 Ints6l-201ENSMUST00000039374 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh18Q8VHR0 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh18Q8VHR0 Piwil1-202ENSMUST00000195959 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh18Q8VHR0 Gm10699-201ENSMUST00000098916 2130 ntBASIC11.15□□□□□ -0.62
Pcdh18Q8VHR0 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh18Q8VHR0 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Pcdh18Q8VHR0 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Pcdh18Q8VHR0 Oas1h-201ENSMUST00000072476 1703 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Pcdh18Q8VHR0 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Pcdh18Q8VHR0 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Pcdh18Q8VHR0 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Pcdh18Q8VHR0 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC11.15□□□□□ -0.63
Pcdh18Q8VHR0 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh18Q8VHR0 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh18Q8VHR0 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC11.14□□□□□ -0.63
Pcdh18Q8VHR0 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh18Q8VHR0 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.14□□□□□ -0.63
Pcdh18Q8VHR0 Trem1-201ENSMUST00000048782 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh18Q8VHR0 Rapgef4os2-201ENSMUST00000128165 2116 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh18Q8VHR0 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh18Q8VHR0 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh18Q8VHR0 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh18Q8VHR0 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Pcdh18Q8VHR0 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
Pcdh18Q8VHR0 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Pcdh18Q8VHR0 Gm11793-201ENSMUST00000120433 981 ntBASIC11.14□□□□□ -0.63
Pcdh18Q8VHR0 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.14□□□□□ -0.63
Pcdh18Q8VHR0 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.14□□□□□ -0.63
Pcdh18Q8VHR0 Rprl1-201ENSMUST00000158050 327 ntBASIC11.14□□□□□ -0.63
Pcdh18Q8VHR0 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh18Q8VHR0 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.14□□□□□ -0.63
Pcdh18Q8VHR0 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.14□□□□□ -0.63
Pcdh18Q8VHR0 Gm5950-201ENSMUST00000213337 772 ntBASIC11.14□□□□□ -0.63
Pcdh18Q8VHR0 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Pcdh18Q8VHR0 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.14□□□□□ -0.63
Pcdh18Q8VHR0 Morn2-202ENSMUST00000227729 656 ntBASIC11.14□□□□□ -0.63
Pcdh18Q8VHR0 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh18Q8VHR0 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh18Q8VHR0 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms