Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Rbm28Q8CGC6 Gm1840-201ENSMUST00000051687 1432 ntBASIC13.63□□□□□ -0.23
Rbm28Q8CGC6 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rbm28Q8CGC6 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rbm28Q8CGC6 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rbm28Q8CGC6 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rbm28Q8CGC6 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rbm28Q8CGC6 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rbm28Q8CGC6 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rbm28Q8CGC6 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Rbm28Q8CGC6 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rbm28Q8CGC6 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rbm28Q8CGC6 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rbm28Q8CGC6 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rbm28Q8CGC6 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rbm28Q8CGC6 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rbm28Q8CGC6 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rbm28Q8CGC6 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rbm28Q8CGC6 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rbm28Q8CGC6 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Rbm28Q8CGC6 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rbm28Q8CGC6 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC13.62□□□□□ -0.23
Rbm28Q8CGC6 Gm12899-201ENSMUST00000120565 551 ntBASIC13.62□□□□□ -0.23
Rbm28Q8CGC6 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC13.62□□□□□ -0.23
Rbm28Q8CGC6 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rbm28Q8CGC6 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rbm28Q8CGC6 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rbm28Q8CGC6 Gm44329-201ENSMUST00000197469 112 ntBASIC13.62□□□□□ -0.23
Rbm28Q8CGC6 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC13.62□□□□□ -0.23
Rbm28Q8CGC6 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC13.62□□□□□ -0.23
Rbm28Q8CGC6 Gm2875-201ENSMUST00000211333 360 ntBASIC13.62□□□□□ -0.23
Rbm28Q8CGC6 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC13.62□□□□□ -0.23
Rbm28Q8CGC6 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rbm28Q8CGC6 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Rbm28Q8CGC6 Olfr584-201ENSMUST00000098210 964 ntBASIC13.62□□□□□ -0.23
Rbm28Q8CGC6 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rbm28Q8CGC6 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rbm28Q8CGC6 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rbm28Q8CGC6 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC13.62□□□□□ -0.23
Rbm28Q8CGC6 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rbm28Q8CGC6 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC13.62□□□□□ -0.23
Rbm28Q8CGC6 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rbm28Q8CGC6 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rbm28Q8CGC6 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rbm28Q8CGC6 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rbm28Q8CGC6 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC13.62□□□□□ -0.23
Rbm28Q8CGC6 Gm38194-201ENSMUST00000194529 2211 ntBASIC13.62□□□□□ -0.23
Rbm28Q8CGC6 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rbm28Q8CGC6 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rbm28Q8CGC6 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rbm28Q8CGC6 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rbm28Q8CGC6 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rbm28Q8CGC6 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rbm28Q8CGC6 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rbm28Q8CGC6 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rbm28Q8CGC6 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rbm28Q8CGC6 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rbm28Q8CGC6 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rbm28Q8CGC6 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rbm28Q8CGC6 Gm12419-201ENSMUST00000116649 636 ntBASIC13.61□□□□□ -0.23
Rbm28Q8CGC6 Gm11700-201ENSMUST00000119409 403 ntBASIC13.61□□□□□ -0.23
Rbm28Q8CGC6 Gm12856-201ENSMUST00000119471 1293 ntBASIC13.61□□□□□ -0.23
Rbm28Q8CGC6 Mir1901-201ENSMUST00000122616 78 ntBASIC13.61□□□□□ -0.23
Rbm28Q8CGC6 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rbm28Q8CGC6 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rbm28Q8CGC6 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Rbm28Q8CGC6 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rbm28Q8CGC6 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rbm28Q8CGC6 Gm37981-201ENSMUST00000194280 535 ntBASIC13.61□□□□□ -0.23
Rbm28Q8CGC6 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rbm28Q8CGC6 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC13.61□□□□□ -0.23
Rbm28Q8CGC6 Gm8342-201ENSMUST00000209839 757 ntBASIC13.61□□□□□ -0.23
Rbm28Q8CGC6 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC13.61□□□□□ -0.23
Rbm28Q8CGC6 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rbm28Q8CGC6 Gm9661-201ENSMUST00000221611 1122 ntBASIC13.61□□□□□ -0.23
Rbm28Q8CGC6 AC124433.1-201ENSMUST00000224483 1063 ntBASIC13.61□□□□□ -0.23
Rbm28Q8CGC6 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rbm28Q8CGC6 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Rbm28Q8CGC6 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rbm28Q8CGC6 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rbm28Q8CGC6 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rbm28Q8CGC6 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rbm28Q8CGC6 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rbm28Q8CGC6 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rbm28Q8CGC6 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Rbm28Q8CGC6 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rbm28Q8CGC6 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rbm28Q8CGC6 Gm43727-201ENSMUST00000198021 2647 ntBASIC13.6□□□□□ -0.23
Rbm28Q8CGC6 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rbm28Q8CGC6 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rbm28Q8CGC6 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rbm28Q8CGC6 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Rbm28Q8CGC6 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rbm28Q8CGC6 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rbm28Q8CGC6 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rbm28Q8CGC6 Gm18986-201ENSMUST00000216029 1986 ntBASIC13.6□□□□□ -0.23
Rbm28Q8CGC6 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Rbm28Q8CGC6 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rbm28Q8CGC6 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rbm28Q8CGC6 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms