Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Lysmd4Q8CC84 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Lysmd4Q8CC84 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lysmd4Q8CC84 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lysmd4Q8CC84 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC10.31□□□□□ -0.76
Lysmd4Q8CC84 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Lysmd4Q8CC84 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lysmd4Q8CC84 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lysmd4Q8CC84 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Lysmd4Q8CC84 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Lysmd4Q8CC84 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Lysmd4Q8CC84 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Lysmd4Q8CC84 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC10.31□□□□□ -0.76
Lysmd4Q8CC84 Gm33366-201ENSMUST00000195583 3827 ntBASIC10.31□□□□□ -0.76
Lysmd4Q8CC84 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC10.31□□□□□ -0.76
Lysmd4Q8CC84 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lysmd4Q8CC84 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Lysmd4Q8CC84 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Lysmd4Q8CC84 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Lysmd4Q8CC84 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Lysmd4Q8CC84 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lysmd4Q8CC84 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lysmd4Q8CC84 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lysmd4Q8CC84 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC10.31□□□□□ -0.76
Lysmd4Q8CC84 Gm6963-201ENSMUST00000147879 379 ntBASIC10.31□□□□□ -0.76
Lysmd4Q8CC84 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
Lysmd4Q8CC84 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Lysmd4Q8CC84 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC10.31□□□□□ -0.76
Lysmd4Q8CC84 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Lysmd4Q8CC84 Gm29396-201ENSMUST00000185659 716 ntBASIC10.31□□□□□ -0.76
Lysmd4Q8CC84 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC10.31□□□□□ -0.76
Lysmd4Q8CC84 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lysmd4Q8CC84 Gm45880-201ENSMUST00000213041 853 ntBASIC10.31□□□□□ -0.76
Lysmd4Q8CC84 Gm2553-201ENSMUST00000215986 605 ntBASIC10.31□□□□□ -0.76
Lysmd4Q8CC84 Gm5705-201ENSMUST00000066241 711 ntBASIC10.31□□□□□ -0.76
Lysmd4Q8CC84 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Lysmd4Q8CC84 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lysmd4Q8CC84 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC10.31□□□□□ -0.76
Lysmd4Q8CC84 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lysmd4Q8CC84 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lysmd4Q8CC84 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lysmd4Q8CC84 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Lysmd4Q8CC84 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lysmd4Q8CC84 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Lysmd4Q8CC84 Gm5846-201ENSMUST00000193146 1414 ntBASIC10.31□□□□□ -0.76
Lysmd4Q8CC84 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Lysmd4Q8CC84 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC10.31□□□□□ -0.76
Lysmd4Q8CC84 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lysmd4Q8CC84 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Lysmd4Q8CC84 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lysmd4Q8CC84 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Lysmd4Q8CC84 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lysmd4Q8CC84 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lysmd4Q8CC84 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lysmd4Q8CC84 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Lysmd4Q8CC84 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC10.3□□□□□ -0.76
Lysmd4Q8CC84 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Lysmd4Q8CC84 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Lysmd4Q8CC84 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Lysmd4Q8CC84 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Lysmd4Q8CC84 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Lysmd4Q8CC84 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Lysmd4Q8CC84 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Lysmd4Q8CC84 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Lysmd4Q8CC84 CT010447.1-201ENSMUST00000225657 1608 ntBASIC10.3□□□□□ -0.76
Lysmd4Q8CC84 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Lysmd4Q8CC84 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Lysmd4Q8CC84 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Lysmd4Q8CC84 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Lysmd4Q8CC84 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Lysmd4Q8CC84 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Lysmd4Q8CC84 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
Lysmd4Q8CC84 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC10.3□□□□□ -0.76
Lysmd4Q8CC84 Gm11930-201ENSMUST00000117788 190 ntBASIC10.3□□□□□ -0.76
Lysmd4Q8CC84 Gm13786-201ENSMUST00000122371 333 ntBASIC10.3□□□□□ -0.76
Lysmd4Q8CC84 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Lysmd4Q8CC84 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC10.3□□□□□ -0.76
Lysmd4Q8CC84 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC10.3□□□□□ -0.76
Lysmd4Q8CC84 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC10.3□□□□□ -0.76
Lysmd4Q8CC84 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Lysmd4Q8CC84 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Lysmd4Q8CC84 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC10.3□□□□□ -0.76
Lysmd4Q8CC84 Gm37424-201ENSMUST00000191727 561 ntBASIC10.3□□□□□ -0.76
Lysmd4Q8CC84 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC10.3□□□□□ -0.76
Lysmd4Q8CC84 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Lysmd4Q8CC84 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC10.3□□□□□ -0.76
Lysmd4Q8CC84 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Lysmd4Q8CC84 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Lysmd4Q8CC84 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Lysmd4Q8CC84 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Lysmd4Q8CC84 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Lysmd4Q8CC84 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Lysmd4Q8CC84 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Lysmd4Q8CC84 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Lysmd4Q8CC84 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Lysmd4Q8CC84 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Lysmd4Q8CC84 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Lysmd4Q8CC84 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Lysmd4Q8CC84 Gm45416-201ENSMUST00000209713 2201 ntBASIC10.3□□□□□ -0.76
Lysmd4Q8CC84 Gm19327-201ENSMUST00000220651 3271 ntBASIC10.3□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms