Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim9Q8C7M3 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC12.68□□□□□ -0.38
Trim9Q8C7M3 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim9Q8C7M3 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC12.68□□□□□ -0.38
Trim9Q8C7M3 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim9Q8C7M3 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim9Q8C7M3 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim9Q8C7M3 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim9Q8C7M3 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim9Q8C7M3 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim9Q8C7M3 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim9Q8C7M3 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim9Q8C7M3 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trim9Q8C7M3 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.68□□□□□ -0.38
Trim9Q8C7M3 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim9Q8C7M3 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trim9Q8C7M3 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim9Q8C7M3 AC153380.1-201ENSMUST00000214959 2364 ntBASIC12.67□□□□□ -0.38
Trim9Q8C7M3 Rgr-203ENSMUST00000225070 4704 ntBASIC12.67□□□□□ -0.38
Trim9Q8C7M3 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trim9Q8C7M3 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim9Q8C7M3 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim9Q8C7M3 Gm28424-201ENSMUST00000187393 1319 ntBASIC12.67□□□□□ -0.38
Trim9Q8C7M3 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim9Q8C7M3 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim9Q8C7M3 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC12.67□□□□□ -0.38
Trim9Q8C7M3 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim9Q8C7M3 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim9Q8C7M3 Gm22920-201ENSMUST00000102175 109 ntBASIC12.67□□□□□ -0.38
Trim9Q8C7M3 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trim9Q8C7M3 Gm15374-201ENSMUST00000119313 844 ntBASIC12.67□□□□□ -0.38
Trim9Q8C7M3 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC12.67□□□□□ -0.38
Trim9Q8C7M3 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC12.67□□□□□ -0.38
Trim9Q8C7M3 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim9Q8C7M3 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC12.67□□□□□ -0.38
Trim9Q8C7M3 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.67□□□□□ -0.38
Trim9Q8C7M3 Gm6439-201ENSMUST00000199849 862 ntBASIC12.67□□□□□ -0.38
Trim9Q8C7M3 Gm44506-201ENSMUST00000206278 965 ntBASIC12.67□□□□□ -0.38
Trim9Q8C7M3 Gm17825-201ENSMUST00000206836 794 ntBASIC12.67□□□□□ -0.38
Trim9Q8C7M3 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC12.67□□□□□ -0.38
Trim9Q8C7M3 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim9Q8C7M3 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trim9Q8C7M3 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Trim9Q8C7M3 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Trim9Q8C7M3 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim9Q8C7M3 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim9Q8C7M3 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim9Q8C7M3 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim9Q8C7M3 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC12.67□□□□□ -0.38
Trim9Q8C7M3 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim9Q8C7M3 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim9Q8C7M3 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trim9Q8C7M3 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trim9Q8C7M3 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim9Q8C7M3 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trim9Q8C7M3 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim9Q8C7M3 Gm29358-202ENSMUST00000187941 3227 ntBASIC12.66□□□□□ -0.38
Trim9Q8C7M3 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim9Q8C7M3 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trim9Q8C7M3 Gm44663-201ENSMUST00000206898 3150 ntBASIC12.66□□□□□ -0.38
Trim9Q8C7M3 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim9Q8C7M3 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim9Q8C7M3 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim9Q8C7M3 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC12.66□□□□□ -0.38
Trim9Q8C7M3 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim9Q8C7M3 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC12.66□□□□□ -0.38
Trim9Q8C7M3 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim9Q8C7M3 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Trim9Q8C7M3 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim9Q8C7M3 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim9Q8C7M3 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Trim9Q8C7M3 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC12.66□□□□□ -0.38
Trim9Q8C7M3 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC12.66□□□□□ -0.38
Trim9Q8C7M3 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim9Q8C7M3 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC12.66□□□□□ -0.38
Trim9Q8C7M3 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim9Q8C7M3 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC12.66□□□□□ -0.38
Trim9Q8C7M3 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC12.66□□□□□ -0.38
Trim9Q8C7M3 Gm4959-201ENSMUST00000197271 1044 ntBASIC12.66□□□□□ -0.38
Trim9Q8C7M3 AC102569.1-201ENSMUST00000221563 685 ntBASIC12.66□□□□□ -0.38
Trim9Q8C7M3 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim9Q8C7M3 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC12.66□□□□□ -0.38
Trim9Q8C7M3 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Trim9Q8C7M3 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Trim9Q8C7M3 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.66□□□□□ -0.38
Trim9Q8C7M3 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim9Q8C7M3 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim9Q8C7M3 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim9Q8C7M3 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim9Q8C7M3 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim9Q8C7M3 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim9Q8C7M3 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim9Q8C7M3 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim9Q8C7M3 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim9Q8C7M3 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trim9Q8C7M3 Gm13135-201ENSMUST00000117628 3121 ntBASIC12.66□□□□□ -0.38
Trim9Q8C7M3 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Trim9Q8C7M3 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim9Q8C7M3 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trim9Q8C7M3 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms