Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Gm8170-201ENSMUST00000218581 945 ntBASIC15.24■□□□□ 0.03
Cps1Q8C196 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cps1Q8C196 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cps1Q8C196 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Cps1Q8C196 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC15.24■□□□□ 0.03
Cps1Q8C196 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cps1Q8C196 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cps1Q8C196 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cps1Q8C196 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cps1Q8C196 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cps1Q8C196 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Cps1Q8C196 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cps1Q8C196 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cps1Q8C196 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cps1Q8C196 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC15.23■□□□□ 0.03
Cps1Q8C196 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cps1Q8C196 Gm43972-201ENSMUST00000181398 1467 ntBASIC15.23■□□□□ 0.03
Cps1Q8C196 AC159810.1-201ENSMUST00000214838 1480 ntBASIC15.23■□□□□ 0.03
Cps1Q8C196 Acnat1-201ENSMUST00000095086 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cps1Q8C196 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cps1Q8C196 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC15.23■□□□□ 0.03
Cps1Q8C196 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cps1Q8C196 Gm22495-201ENSMUST00000104492 126 ntBASIC15.23■□□□□ 0.03
Cps1Q8C196 Tnnt3-214ENSMUST00000105953 1049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cps1Q8C196 Focad-202ENSMUST00000107147 1177 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cps1Q8C196 Srp14-202ENSMUST00000110862 587 ntTSL 2 BASIC15.23■□□□□ 0.03
Cps1Q8C196 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC15.23■□□□□ 0.03
Cps1Q8C196 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Cps1Q8C196 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC15.23■□□□□ 0.03
Cps1Q8C196 Cd9-ps-201ENSMUST00000174687 650 ntBASIC15.23■□□□□ 0.03
Cps1Q8C196 Gm18123-201ENSMUST00000210874 822 ntBASIC15.23■□□□□ 0.03
Cps1Q8C196 Gm32786-201ENSMUST00000211351 628 ntTSL 3 BASIC15.23■□□□□ 0.03
Cps1Q8C196 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cps1Q8C196 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
Cps1Q8C196 Rps9-201ENSMUST00000006496 751 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cps1Q8C196 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cps1Q8C196 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cps1Q8C196 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cps1Q8C196 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC15.23■□□□□ 0.03
Cps1Q8C196 Gm43570-201ENSMUST00000199951 3688 ntBASIC15.23■□□□□ 0.03
Cps1Q8C196 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Cps1Q8C196 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cps1Q8C196 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cps1Q8C196 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cps1Q8C196 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cps1Q8C196 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cps1Q8C196 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cps1Q8C196 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC15.23■□□□□ 0.03
Cps1Q8C196 CT010480.4-201ENSMUST00000224654 2283 ntBASIC15.23■□□□□ 0.03
Cps1Q8C196 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cps1Q8C196 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cps1Q8C196 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cps1Q8C196 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Cps1Q8C196 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Cps1Q8C196 Gm20633-201ENSMUST00000176742 2831 ntBASIC15.23■□□□□ 0.03
Cps1Q8C196 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC15.22■□□□□ 0.03
Cps1Q8C196 Has2os-202ENSMUST00000163314 633 ntTSL 3 BASIC15.22■□□□□ 0.03
Cps1Q8C196 Gm27826-201ENSMUST00000175282 255 ntBASIC15.22■□□□□ 0.03
Cps1Q8C196 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cps1Q8C196 Gm5254-201ENSMUST00000188353 977 ntBASIC15.22■□□□□ 0.03
Cps1Q8C196 Gm45527-201ENSMUST00000211052 774 ntBASIC15.22■□□□□ 0.03
Cps1Q8C196 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cps1Q8C196 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cps1Q8C196 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
Cps1Q8C196 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Cps1Q8C196 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cps1Q8C196 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Cps1Q8C196 AC156031.2-201ENSMUST00000213107 3310 ntBASIC15.22■□□□□ 0.03
Cps1Q8C196 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
Cps1Q8C196 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cps1Q8C196 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cps1Q8C196 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cps1Q8C196 Msl1-202ENSMUST00000037930 1303 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cps1Q8C196 5730422E09Rik-201ENSMUST00000180733 1740 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cps1Q8C196 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cps1Q8C196 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cps1Q8C196 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cps1Q8C196 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cps1Q8C196 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cps1Q8C196 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cps1Q8C196 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cps1Q8C196 Sfi1-204ENSMUST00000118627 831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cps1Q8C196 Gm26550-201ENSMUST00000180699 1184 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cps1Q8C196 Gm7765-201ENSMUST00000182585 974 ntBASIC15.22■□□□□ 0.03
Cps1Q8C196 4930486N12Rik-201ENSMUST00000206668 632 ntBASIC15.22■□□□□ 0.03
Cps1Q8C196 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Cps1Q8C196 Eif2c5-201ENSMUST00000125609 1416 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cps1Q8C196 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
Cps1Q8C196 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cps1Q8C196 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Cps1Q8C196 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cps1Q8C196 AC167022.1-201ENSMUST00000218647 1458 ntBASIC15.21■□□□□ 0.03
Cps1Q8C196 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cps1Q8C196 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cps1Q8C196 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cps1Q8C196 Gm19027-201ENSMUST00000187291 1355 ntBASIC15.21■□□□□ 0.03
Cps1Q8C196 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cps1Q8C196 Gm5159-201ENSMUST00000212733 1652 ntBASIC15.21■□□□□ 0.03
Cps1Q8C196 Gm12666-201ENSMUST00000123179 764 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Cps1Q8C196 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms