Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usp1Q8BJQ2 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Usp1Q8BJQ2 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usp1Q8BJQ2 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usp1Q8BJQ2 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp1Q8BJQ2 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Usp1Q8BJQ2 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp1Q8BJQ2 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC12.3□□□□□ -0.44
Usp1Q8BJQ2 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp1Q8BJQ2 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp1Q8BJQ2 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.3□□□□□ -0.44
Usp1Q8BJQ2 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Usp1Q8BJQ2 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp1Q8BJQ2 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp1Q8BJQ2 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Usp1Q8BJQ2 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp1Q8BJQ2 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Usp1Q8BJQ2 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Usp1Q8BJQ2 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC12.3□□□□□ -0.44
Usp1Q8BJQ2 Gm6754-201ENSMUST00000117124 913 ntBASIC12.3□□□□□ -0.44
Usp1Q8BJQ2 Gm14219-201ENSMUST00000120414 288 ntBASIC12.3□□□□□ -0.44
Usp1Q8BJQ2 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC12.3□□□□□ -0.44
Usp1Q8BJQ2 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC12.3□□□□□ -0.44
Usp1Q8BJQ2 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Usp1Q8BJQ2 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp1Q8BJQ2 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Usp1Q8BJQ2 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Usp1Q8BJQ2 Mir8093-201ENSMUST00000185043 137 ntBASIC12.3□□□□□ -0.44
Usp1Q8BJQ2 Gm7593-201ENSMUST00000187246 644 ntBASIC12.3□□□□□ -0.44
Usp1Q8BJQ2 Gm8531-201ENSMUST00000188319 893 ntBASIC12.3□□□□□ -0.44
Usp1Q8BJQ2 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC12.3□□□□□ -0.44
Usp1Q8BJQ2 AC165154.1-201ENSMUST00000226661 340 ntBASIC12.3□□□□□ -0.44
Usp1Q8BJQ2 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp1Q8BJQ2 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Usp1Q8BJQ2 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp1Q8BJQ2 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp1Q8BJQ2 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp1Q8BJQ2 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp1Q8BJQ2 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp1Q8BJQ2 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp1Q8BJQ2 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.3□□□□□ -0.44
Usp1Q8BJQ2 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Usp1Q8BJQ2 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Usp1Q8BJQ2 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp1Q8BJQ2 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Usp1Q8BJQ2 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.3□□□□□ -0.44
Usp1Q8BJQ2 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Usp1Q8BJQ2 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC12.3□□□□□ -0.44
Usp1Q8BJQ2 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Usp1Q8BJQ2 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.3□□□□□ -0.44
Usp1Q8BJQ2 Cog3-203ENSMUST00000227473 4197 ntBASIC12.3□□□□□ -0.44
Usp1Q8BJQ2 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Usp1Q8BJQ2 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Usp1Q8BJQ2 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Usp1Q8BJQ2 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
Usp1Q8BJQ2 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Usp1Q8BJQ2 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Usp1Q8BJQ2 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Usp1Q8BJQ2 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Usp1Q8BJQ2 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Usp1Q8BJQ2 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Usp1Q8BJQ2 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Usp1Q8BJQ2 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Usp1Q8BJQ2 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Usp1Q8BJQ2 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Usp1Q8BJQ2 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Usp1Q8BJQ2 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Usp1Q8BJQ2 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Usp1Q8BJQ2 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Usp1Q8BJQ2 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Usp1Q8BJQ2 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC12.29□□□□□ -0.44
Usp1Q8BJQ2 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Usp1Q8BJQ2 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.29□□□□□ -0.44
Usp1Q8BJQ2 Gm13937-201ENSMUST00000121000 988 ntBASIC12.29□□□□□ -0.44
Usp1Q8BJQ2 Gm14441-201ENSMUST00000121960 540 ntBASIC12.29□□□□□ -0.44
Usp1Q8BJQ2 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Usp1Q8BJQ2 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Usp1Q8BJQ2 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.29□□□□□ -0.44
Usp1Q8BJQ2 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC12.29□□□□□ -0.44
Usp1Q8BJQ2 Gm26134-201ENSMUST00000178484 110 ntBASIC12.29□□□□□ -0.44
Usp1Q8BJQ2 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC12.29□□□□□ -0.44
Usp1Q8BJQ2 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC12.29□□□□□ -0.44
Usp1Q8BJQ2 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Usp1Q8BJQ2 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Usp1Q8BJQ2 Gm4978-201ENSMUST00000071565 801 ntBASIC12.29□□□□□ -0.44
Usp1Q8BJQ2 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Usp1Q8BJQ2 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Usp1Q8BJQ2 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Usp1Q8BJQ2 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Usp1Q8BJQ2 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Usp1Q8BJQ2 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Usp1Q8BJQ2 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Usp1Q8BJQ2 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Usp1Q8BJQ2 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.29□□□□□ -0.44
Usp1Q8BJQ2 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.29□□□□□ -0.44
Usp1Q8BJQ2 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Usp1Q8BJQ2 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Usp1Q8BJQ2 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Usp1Q8BJQ2 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.29□□□□□ -0.44
Usp1Q8BJQ2 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms