Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usp6nlQ80XC3 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usp6nlQ80XC3 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usp6nlQ80XC3 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usp6nlQ80XC3 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usp6nlQ80XC3 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usp6nlQ80XC3 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Usp6nlQ80XC3 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usp6nlQ80XC3 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usp6nlQ80XC3 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usp6nlQ80XC3 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usp6nlQ80XC3 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usp6nlQ80XC3 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Usp6nlQ80XC3 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.75□□□□□ -0.37
Usp6nlQ80XC3 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usp6nlQ80XC3 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp6nlQ80XC3 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp6nlQ80XC3 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
Usp6nlQ80XC3 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Usp6nlQ80XC3 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.74□□□□□ -0.37
Usp6nlQ80XC3 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Usp6nlQ80XC3 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Usp6nlQ80XC3 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp6nlQ80XC3 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Usp6nlQ80XC3 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp6nlQ80XC3 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp6nlQ80XC3 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Usp6nlQ80XC3 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp6nlQ80XC3 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Usp6nlQ80XC3 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Usp6nlQ80XC3 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Usp6nlQ80XC3 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp6nlQ80XC3 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.74□□□□□ -0.37
Usp6nlQ80XC3 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp6nlQ80XC3 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Usp6nlQ80XC3 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Usp6nlQ80XC3 Gm24791-201ENSMUST00000104284 131 ntBASIC12.74□□□□□ -0.37
Usp6nlQ80XC3 Gm12179-201ENSMUST00000118344 1272 ntBASIC12.74□□□□□ -0.37
Usp6nlQ80XC3 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC12.74□□□□□ -0.37
Usp6nlQ80XC3 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Usp6nlQ80XC3 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Usp6nlQ80XC3 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC12.74□□□□□ -0.37
Usp6nlQ80XC3 Mir6923-201ENSMUST00000184592 72 ntBASIC12.74□□□□□ -0.37
Usp6nlQ80XC3 Gm37284-201ENSMUST00000193607 539 ntBASIC12.74□□□□□ -0.37
Usp6nlQ80XC3 Gm18204-201ENSMUST00000209835 793 ntBASIC12.74□□□□□ -0.37
Usp6nlQ80XC3 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Usp6nlQ80XC3 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp6nlQ80XC3 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Usp6nlQ80XC3 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp6nlQ80XC3 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Usp6nlQ80XC3 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Usp6nlQ80XC3 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp6nlQ80XC3 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Usp6nlQ80XC3 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp6nlQ80XC3 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Usp6nlQ80XC3 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.74□□□□□ -0.37
Usp6nlQ80XC3 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Usp6nlQ80XC3 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Usp6nlQ80XC3 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp6nlQ80XC3 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.74□□□□□ -0.37
Usp6nlQ80XC3 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Usp6nlQ80XC3 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.74□□□□□ -0.37
Usp6nlQ80XC3 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Usp6nlQ80XC3 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp6nlQ80XC3 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp6nlQ80XC3 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Usp6nlQ80XC3 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp6nlQ80XC3 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.73□□□□□ -0.37
Usp6nlQ80XC3 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Usp6nlQ80XC3 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp6nlQ80XC3 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp6nlQ80XC3 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp6nlQ80XC3 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp6nlQ80XC3 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp6nlQ80XC3 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Usp6nlQ80XC3 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp6nlQ80XC3 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp6nlQ80XC3 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp6nlQ80XC3 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp6nlQ80XC3 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp6nlQ80XC3 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC12.73□□□□□ -0.37
Usp6nlQ80XC3 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Usp6nlQ80XC3 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Usp6nlQ80XC3 Gm14071-201ENSMUST00000117817 509 ntBASIC12.73□□□□□ -0.37
Usp6nlQ80XC3 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Usp6nlQ80XC3 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC12.73□□□□□ -0.37
Usp6nlQ80XC3 Mir7051-201ENSMUST00000184167 73 ntBASIC12.73□□□□□ -0.37
Usp6nlQ80XC3 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp6nlQ80XC3 Gm3433-201ENSMUST00000210149 1058 ntBASIC12.73□□□□□ -0.37
Usp6nlQ80XC3 Gm6390-201ENSMUST00000215034 589 ntBASIC12.73□□□□□ -0.37
Usp6nlQ80XC3 Gm18065-201ENSMUST00000221395 526 ntBASIC12.73□□□□□ -0.37
Usp6nlQ80XC3 AC140375.1-201ENSMUST00000225421 694 ntBASIC12.73□□□□□ -0.37
Usp6nlQ80XC3 CT573086.4-201ENSMUST00000226729 342 ntBASIC12.73□□□□□ -0.37
Usp6nlQ80XC3 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp6nlQ80XC3 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Usp6nlQ80XC3 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Usp6nlQ80XC3 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.73□□□□□ -0.37
Usp6nlQ80XC3 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Usp6nlQ80XC3 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.73□□□□□ -0.37
Usp6nlQ80XC3 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms