Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh8Q7TSK3 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Pcdh8Q7TSK3 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh8Q7TSK3 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh8Q7TSK3 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh8Q7TSK3 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh8Q7TSK3 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh8Q7TSK3 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh8Q7TSK3 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh8Q7TSK3 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh8Q7TSK3 Gm16071-201ENSMUST00000119589 793 ntBASIC11.4□□□□□ -0.58
Pcdh8Q7TSK3 Gm15782-201ENSMUST00000121073 445 ntBASIC11.4□□□□□ -0.58
Pcdh8Q7TSK3 Gm13182-201ENSMUST00000122241 312 ntBASIC11.4□□□□□ -0.58
Pcdh8Q7TSK3 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh8Q7TSK3 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh8Q7TSK3 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh8Q7TSK3 Gm9192-201ENSMUST00000183221 985 ntBASIC11.4□□□□□ -0.58
Pcdh8Q7TSK3 Gm17826-201ENSMUST00000189720 798 ntBASIC11.4□□□□□ -0.58
Pcdh8Q7TSK3 Gm3551-201ENSMUST00000190750 664 ntBASIC11.4□□□□□ -0.58
Pcdh8Q7TSK3 Gm2875-201ENSMUST00000211333 360 ntBASIC11.4□□□□□ -0.58
Pcdh8Q7TSK3 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.4□□□□□ -0.58
Pcdh8Q7TSK3 Gm9661-201ENSMUST00000221611 1122 ntBASIC11.4□□□□□ -0.58
Pcdh8Q7TSK3 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh8Q7TSK3 Prrxl1-205ENSMUST00000228878 723 ntBASIC11.4□□□□□ -0.58
Pcdh8Q7TSK3 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh8Q7TSK3 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
Pcdh8Q7TSK3 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Pcdh8Q7TSK3 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh8Q7TSK3 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh8Q7TSK3 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh8Q7TSK3 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh8Q7TSK3 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Pcdh8Q7TSK3 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh8Q7TSK3 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh8Q7TSK3 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh8Q7TSK3 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh8Q7TSK3 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Pcdh8Q7TSK3 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Pcdh8Q7TSK3 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Pcdh8Q7TSK3 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Pcdh8Q7TSK3 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Pcdh8Q7TSK3 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Pcdh8Q7TSK3 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Pcdh8Q7TSK3 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
Pcdh8Q7TSK3 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Pcdh8Q7TSK3 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.39□□□□□ -0.59
Pcdh8Q7TSK3 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh8Q7TSK3 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh8Q7TSK3 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh8Q7TSK3 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh8Q7TSK3 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.39□□□□□ -0.59
Pcdh8Q7TSK3 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh8Q7TSK3 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh8Q7TSK3 AC166836.1-201ENSMUST00000219933 1795 ntBASIC11.39□□□□□ -0.59
Pcdh8Q7TSK3 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh8Q7TSK3 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh8Q7TSK3 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
Pcdh8Q7TSK3 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC11.39□□□□□ -0.59
Pcdh8Q7TSK3 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Pcdh8Q7TSK3 Gm22711-201ENSMUST00000116890 133 ntBASIC11.39□□□□□ -0.59
Pcdh8Q7TSK3 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh8Q7TSK3 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh8Q7TSK3 Gm14441-201ENSMUST00000121960 540 ntBASIC11.39□□□□□ -0.59
Pcdh8Q7TSK3 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC11.39□□□□□ -0.59
Pcdh8Q7TSK3 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh8Q7TSK3 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh8Q7TSK3 Gm22138-201ENSMUST00000158748 128 ntBASIC11.39□□□□□ -0.59
Pcdh8Q7TSK3 Gm8194-201ENSMUST00000159783 859 ntBASIC11.39□□□□□ -0.59
Pcdh8Q7TSK3 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.39□□□□□ -0.59
Pcdh8Q7TSK3 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC11.39□□□□□ -0.59
Pcdh8Q7TSK3 Gm17877-201ENSMUST00000192578 814 ntBASIC11.39□□□□□ -0.59
Pcdh8Q7TSK3 Gm37981-201ENSMUST00000194280 535 ntBASIC11.39□□□□□ -0.59
Pcdh8Q7TSK3 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.39□□□□□ -0.59
Pcdh8Q7TSK3 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC11.39□□□□□ -0.59
Pcdh8Q7TSK3 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
Pcdh8Q7TSK3 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.39□□□□□ -0.59
Pcdh8Q7TSK3 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC11.39□□□□□ -0.59
Pcdh8Q7TSK3 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh8Q7TSK3 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh8Q7TSK3 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Pcdh8Q7TSK3 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh8Q7TSK3 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh8Q7TSK3 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Pcdh8Q7TSK3 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh8Q7TSK3 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh8Q7TSK3 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh8Q7TSK3 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Pcdh8Q7TSK3 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Pcdh8Q7TSK3 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh8Q7TSK3 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Pcdh8Q7TSK3 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh8Q7TSK3 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh8Q7TSK3 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh8Q7TSK3 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Pcdh8Q7TSK3 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh8Q7TSK3 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh8Q7TSK3 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Pcdh8Q7TSK3 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh8Q7TSK3 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh8Q7TSK3 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms